RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 C8orf76Q96K31 380 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 B3GALT6Q96L58 329 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 PRRX2Q99811 253 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 LLPHQ9BRT6 129 aaKnown RBP5.69□□□□□ -1.5
ATM-224ENST00000534625 COLEC11Q9BWP8 271 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 RHOBTB2Q9BYZ6 727 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 TRIM6Q9C030 488 aaPredicted RBP5.69□□□□□ -1.5
ATM-224ENST00000534625 CCDC113Q9H0I3 377 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 CXCL16Q9H2A7 254 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 FOXP1Q9H334 677 aaPredicted RBP5.69□□□□□ -1.5
ATM-224ENST00000534625 SFXN1Q9H9B4 322 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 MAN1C1Q9NR34 630 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 CACNG4Q9UBN1 327 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 SSX2IPQ9Y2D8 614 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 NPFFR2Q9Y5X5 522 aa5.69□□□□□ -1.5
ATM-224ENST00000534625 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 DENND4AQ7Z401 1863 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 ZMYM2Q9UBW7 1377 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CCDC195A0A1B0GUA6 201 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 PTGESO14684 152 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 EIF5BO60841 1220 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 N4BP1O75113 896 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 RFPL2O75678 378 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 GLUD1P00367 558 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 C1RP00736 705 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 URODP06132 367 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 SPATA31D3P0C874 917 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 MYBP10242 640 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CYP11B2P19099 503 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 MUTP22033 750 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 RPL13P26373 211 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 CNR2P34972 360 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 STAT5AP42229 794 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 GLUD2P49448 558 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 RBM25P49756 843 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 ITGA1P56199 1179 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 GRIK3Q13003 919 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 ORC2Q13416 577 aaPredicted RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 NAB2Q15742 525 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 USP41Q3LFD5 358 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 TTC38Q5R3I4 469 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 FUT10Q6P4F1 479 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 SPATA31D4Q6ZUB0 917 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CCDC149Q6ZUS6 474 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 OTOP3Q7RTS5 596 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 NOSTRINQ8IVI9 506 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 ZBTB8OSQ8IWT0 167 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 GPR65Q8IYL9 337 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CELF2-AS1Q8N7Q2 184 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 ZNF707Q96C28 371 aaPredicted RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 TRMT2BQ96GJ1 504 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 ZSCAN31Q96LW9 406 aaPredicted RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 CCDC140Q96MF4 163 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CCDC43Q96MW1 224 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 CDIP1Q9H305 208 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 PDZD7Q9H5P4 517 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 POLD4Q9HCU8 107 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 WDR6Q9NNW5 1121 aaKnown RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 PRMT7Q9NVM4 692 aaPredicted RBP5.68□□□□□ -1.5
ATM-224ENST00000534625 SNTG2Q9NY99 539 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 FNIP2Q9P278 1114 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 ADAM28Q9UKQ2 775 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 GPR179Q6PRD1 2367 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 MYO15AQ9UKN7 3530 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 DMDP11532 3685 aa5.68□□□□□ -1.5
ATM-224ENST00000534625 A0A1W2PQU0 124 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 ARHGEF35A5YM69 484 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 CASTOR2A6NHX0 329 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 H0Y858 1186 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 H7BY64 318 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 ACKR2O00590 384 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 SUV39H1O43463 412 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TGM5O43548 720 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TADA2AO75478 443 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TADA3O75528 432 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 RECQL4O94761 1208 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 PRKCBP05771 671 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 RPL17P18621 184 aaKnown RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 U2AF2P26368 475 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATM-224ENST00000534625 CCT6AP40227 531 aaKnown RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 NAMPTP43490 491 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TRAPPC10P48553 1259 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TOB1P50616 345 aaPredicted RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 HMGN5P82970 282 aaKnown RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 ADAM9Q13443 819 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TUSC3Q13454 348 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 PRPF4BQ13523 1007 aaKnown RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 TDGQ13569 410 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 PDIA5Q14554 519 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 HSP90AA2PQ14568 343 aaPredicted RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 IL17AQ16552 155 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 MAPK6Q16659 721 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 PRSS55Q6UWB4 352 aaPredicted RBP5.67□□□□□ -1.5
ATM-224ENST00000534625 CYP26C1Q6V0L0 522 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 PALB2Q86YC2 1186 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 HACE1Q8IYU2 909 aa5.67□□□□□ -1.5
ATM-224ENST00000534625 TMEM105Q8N8V8 129 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms