RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CCND2P30279 289 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FMO1Q01740 532 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 CACNB1Q02641 598 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 CSTF3Q12996 717 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 CAPRIN1Q14444 709 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 ZBED5Q49AG3 693 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ACCSLQ4AC99 568 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 TNS2Q63HR2 1409 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ABRAXAS1Q6UWZ7 409 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 RIPOR1Q6ZS17 1223 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FAM92BQ6ZTR7 304 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FAM151AQ8WW52 585 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FCGR1BQ92637 280 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 GATA6Q92908 595 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SKA1Q96BD8 255 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SLC7A6OSQ96CW6 309 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 HDAC11Q96DB2 347 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SLC45A3Q96JT2 553 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SIX2Q9NPC8 291 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 POLE3Q9NRF9 147 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 RAB6BQ9NRW1 208 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 STOML2Q9UJZ1 356 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 TBX20Q9UMR3 447 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 CARD8Q9Y2G2 431 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 GPC6Q9Y625 555 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 MRASO14807 208 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 MED24O75448 989 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 CYP2D6P10635 497 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 RAG1P15918 1043 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 NPR1P16066 1061 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ELK3P41970 407 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 LAMC2Q13753 1193 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FRG1Q14331 258 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 FASTKD1Q53R41 847 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 AARS2Q5JTZ9 985 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 SPANXN3Q5MJ09 141 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 TCHHL1Q5QJ38 904 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 DNAJB7Q7Z6W7 309 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 CERKQ8TCT0 537 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 DIS3LQ8TF46 1054 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 STARD8Q92502 1023 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 OTUD5Q96G74 571 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 NTPCRQ9BSD7 190 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 NEUROG2Q9H2A3 272 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 TFCP2L1Q9NZI6 479 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 XPO7Q9UIA9 1087 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 NOCTQ9UK39 431 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 CEP152O94986 1710 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 CYP2D7A0A087X1C5 515 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SH3PXD2BA1X283 911 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 RECQL5O94762 991 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 PIGRP01833 764 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 C8BP07358 591 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 NR3C2P08235 984 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 COX4I1P13073 169 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 MMP8P22894 467 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 CRHR1P34998 444 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 HSD17B4P51659 736 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ATN1P54259 1190 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 PEX3P56589 373 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 KCNK10P57789 538 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 OLR1P78380 273 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ZNF33AQ06730 810 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SQLEQ14534 574 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ANO4Q32M45 955 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 EARS2Q5JPH6 523 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 TUBA3EQ6PEY2 450 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 MFSD7Q6UXD7 560 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 MICU2Q8IYU8 434 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 DEFB107AQ8IZN7 70 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 ST13P5Q8NFI4 369 aaPredicted RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 SPATA18Q8TC71 538 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 FNDC8Q8TC99 324 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 JDP2Q8WYK2 163 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 MRRFQ96E11 262 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 UGT2B28Q9BY64 529 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 NGRNQ9NPE2 291 aaKnown RBP4.17□□□□□ -1.74
SOX6-217ENST00000533870 GNPTGQ9UJJ9 305 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 SERPINA10Q9UK55 444 aa4.17□□□□□ -1.74
SOX6-217ENST00000533870 LRRIQ4A6NIV6 560 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 H7C0S8 307 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 GNGT2O14610 69 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 IDH3BO43837 385 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 TBC1D4O60343 1298 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 KRT6AP02538 564 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 KRT6BP04259 564 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 CCNFP41002 786 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 RARRES1P49788 294 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 GABPAQ06546 454 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 MTMR1Q13613 665 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 NCOA4Q13772 614 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 NOMO1Q15155 1222 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 UBE2SQ16763 222 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 GLRA4Q5JXX5 417 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 STRIP1Q5VSL9 837 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 AGAP9Q5VTM2 703 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 LMBRD2Q68DH5 695 aaPredicted RBP4.16□□□□□ -1.74
SOX6-217ENST00000533870 ANKRD52Q8NB46 1076 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 C17orf50Q8WW18 174 aa4.16□□□□□ -1.74
SOX6-217ENST00000533870 CELF1Q92879 486 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms