RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CNOT1A5YKK6 2376 aaKnown RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 CACNA1AO00555 2505 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 TCRBV21S2A2A0A5A6 115 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 PMM2O15305 246 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 CACNG3O60359 315 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 KLKB1P03952 638 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 TGM1P22735 817 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 USP8P40818 1118 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 MTIF2P46199 727 aaKnown RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 DGKGP49619 791 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 CREB5Q02930 508 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 SF3A2Q15428 464 aaKnown RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 CSRP2Q16527 193 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ARHGAP44Q17R89 818 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 PLK5Q496M5 336 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 AASDHQ4L235 1098 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 BSPRYQ5W0U4 402 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 EGFLAMQ63HQ2 1017 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 PM20D1Q6GTS8 502 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 PRR23CQ6ZRP0 262 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ZNF276Q8N554 614 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 MDGA1Q8NFP4 955 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 KREMEN1Q96MU8 473 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ZSWIM1Q9BR11 485 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 MIS12Q9H081 205 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 SMOC1Q9H4F8 434 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ST7Q9NRC1 585 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 MARK1Q9P0L2 795 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 EBF1Q9UH73 591 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 SFMBT1Q9UHJ3 866 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAPN1-225ENST00000533704 ZNF510Q9Y2H8 683 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 DMXL1Q9Y485 3027 aa10.93□□□□□ -0.66
CAPN1-225ENST00000533704 A0A0A0MRY4 1105 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 YJEFN3A6XGL0 299 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 E7ENQ6 273 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 MAP3K13O43283 966 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 TSPAN3O60637 253 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 LRP3O75074 770 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 ADAM23O75077 832 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 RHOBTB1O94844 696 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 EPN2O95208 641 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 CYBBP04839 570 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 HOXB2P14652 356 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 BCKDHBP21953 392 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 KCNA4P22459 653 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 CHKAP35790 457 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 MARSP56192 900 aaKnown RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 DAOAP59103 153 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 GCNT1Q02742 428 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 STILQ15468 1287 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 CNGA2Q16280 664 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 HSF5Q4G112 596 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 SDE2Q6IQ49 451 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 PMF1Q6P1K2 205 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 GJB7Q6PEY0 223 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 BHLHA9Q7RTU4 235 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 TRMT11Q7Z4G4 463 aaKnown RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 CHPFQ8IZ52 775 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 RLN3Q8WXF3 142 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 KCTD13Q8WZ19 329 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 PLD4Q96BZ4 506 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 LOXL4Q96JB6 756 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 ACOX2Q99424 681 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 DUSP15Q9H1R2 295 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 CNGB3Q9NQW8 809 aa10.92□□□□□ -0.66
CAPN1-225ENST00000533704 OLA1Q9NTK5 396 aaKnown RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 AGO1Q9UL18 857 aaKnown RBP10.92□□□□□ -0.66
CAPN1-225ENST00000533704 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 DCDC2BA2VCK2 349 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 PRRT4C9JH25 899 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ZBTB24O43167 697 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 THAP12O43422 761 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 GDF9O60383 454 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 LETM1O95202 739 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 SDHBP21912 280 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 NTSR1P30989 418 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 MPLP40238 635 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 DHPSP49366 369 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 HARS2P49590 506 aaKnown RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ZNF132P52740 706 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ATXN1P54253 815 aaKnown RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 APBA1Q02410 837 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 HSP90AA4PQ58FG1 418 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 DENND1BQ6P3S1 775 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 GBP6Q6ZN66 633 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ARMCX6Q7L4S7 300 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ERMP1Q7Z2K6 904 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms