RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 OR5B17Q8NGF7 314 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 NFICP08651 508 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 MYBL2P10244 700 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RBL1P28749 1068 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 DAB2IPQ5VWQ8 1189 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 IQSEC1Q6DN90 963 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 STARD7Q9NQZ5 370 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 NFASCO94856 1347 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 MAFO75444 373 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 THRAP10827 490 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 TMEM154Q6P9G4 183 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RRM2BQ7LG56 351 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 GPAMQ9HCL2 828 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RNF112Q9ULX5 631 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 TNFSF13BQ9Y275 285 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 SLIT3O75094 1523 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 WDR27A2RRH5 827 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 AKR1A1P14550 325 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 VHLP40337 213 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 TNFSF9P41273 254 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 NR2C2P49116 596 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 HDAC4P56524 1084 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 CSHL1Q14406 222 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RRP1BQ14684 758 aaKnown RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 C15orf59Q2T9L4 293 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 ZCCHC9Q8N567 271 aaKnown RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RRN3Q9NYV6 651 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 ASTN2O75129 1339 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-205ENST00000533464 SIGLEC16A6NMB1 481 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 BTNL10A8MVZ5 291 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RNF103O00237 685 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 VPS26AO75436 327 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 KRT16P08779 473 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 BFSP2Q13515 415 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 MARC1Q5VT66 337 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 ILDR2Q71H61 639 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 TFAP2DQ7Z6R9 452 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 ZCWPW1Q9H0M4 648 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 RXFP1Q9HBX9 757 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 HOXA2O43364 376 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 ALDH2P05091 517 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 MGAT1P26572 445 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 CNGA2Q16280 664 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 UGT3A1Q6NUS8 523 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 SMARCD1Q96GM5 515 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 WWOXQ9NZC7 414 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 V9GYQ6 96 aa18.06■□□□□ 0.48
PHRF1-205ENST00000533464 NCF1BA6NI72 391 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 NCF1CA8MVU1 366 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 SPATA31C2B4DYI2 1134 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 E9PBE3 544 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 ZSCAN9O15535 394 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 KLHL41O60662 606 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 NCF1P14598 390 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CDH17Q12864 832 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TTLL9Q3SXZ7 439 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TAGAPQ8N103 731 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 ARRDC4Q8NCT1 418 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 USP13Q92995 863 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 FAM84AQ96KN4 292 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 EFCAB1Q9HAE3 211 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 H2AFYO75367 372 aaKnown RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 FKBP9O95302 570 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CALB2P22676 271 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 GP5P40197 560 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 PPP3CCP48454 512 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 C16orf87Q6PH81 154 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 FKBP9P1Q75LS8 142 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 PTAR1Q7Z6K3 402 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 GAD1Q99259 594 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TEX12Q9BXU0 123 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CDT1Q9H211 546 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CHCHD3Q9NX63 227 aaKnown RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 NCKIPSDQ9NZQ3 722 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 HES2Q9Y543 173 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 BEX3Q00994 111 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 AASDHQ4L235 1098 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 N4BP2L1Q5TBK1 243 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 SEPT8Q92599 483 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 FAR2Q96K12 515 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 UNKQ9C0B0 810 aaKnown RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TRIM45Q9H8W5 580 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-205ENST00000533464 NCANO14594 1321 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TPST1O60507 370 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 C3P01024 1663 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 RAB27AP51159 221 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CES3Q6UWW8 571 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 TMEM139Q8IV31 216 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 CYGBQ8WWM9 190 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 VPS28Q9UK41 221 aa18.05■□□□□ 0.48
PHRF1-205ENST00000533464 MAGEB16A2A368 324 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 CBX4O00257 560 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 EGFRP00533 1210 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms