RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PIWIL1Q96J94 861 aaKnown RBP21.37■■□□□ 1.01
CCS-208ENST00000533244 NOX5Q96PH1 765 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 SPAG5Q96R06 1193 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 PRMT8Q9NR22 394 aaPredicted RBP21.37■■□□□ 1.01
CCS-208ENST00000533244 SPATA6Q9NWH7 488 aaPredicted RBP21.37■■□□□ 1.01
CCS-208ENST00000533244 CEP83Q9Y592 693 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 A0A1W2PQC6 194 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 LSM8O95777 96 aaKnown RBP21.36■■□□□ 1.01
CCS-208ENST00000533244 EGFP01133 1207 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 IGLV3-27P01718 113 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 HMBSP08397 361 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 STAT1P42224 750 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 NHLH1Q02575 133 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 FILIP1LQ4L180 1135 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 C12orf40Q86WS4 652 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 FAM217AQ8IXS0 508 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 TMEM35BQ8NCS4 154 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 NAP1L5Q96NT1 182 aaPredicted RBP21.36■■□□□ 1.01
CCS-208ENST00000533244 TRIM62Q9BVG3 475 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 ASNSD1Q9NWL6 643 aa21.36■■□□□ 1.01
CCS-208ENST00000533244 AGO1Q9UL18 857 aaKnown RBP21.36■■□□□ 1.01
CCS-208ENST00000533244 ERBB2P04626 1255 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 GLI1P08151 1106 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 TAF3Q5VWG9 929 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 OLFML1Q6UWY5 402 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 PHTF2Q8N3S3 785 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 SPEM1Q8N4L4 309 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 DQX1Q8TE96 717 aaKnown RBP21.35■■□□□ 1.01
CCS-208ENST00000533244 FAM149B1Q96BN6 582 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 POPDC2Q9HBU9 364 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 FBXO4Q9UKT5 387 aa21.35■■□□□ 1.01
CCS-208ENST00000533244 MSI1O43347 362 aaKnown RBP21.34■■□□□ 1.01
CCS-208ENST00000533244 LAMTOR5O43504 91 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 MMEP08473 750 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 NCAM1P13591 858 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 CHRNB2P17787 502 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 GABRB2P47870 512 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 YWHAZP63104 245 aaKnown RBP21.34■■□□□ 1.01
CCS-208ENST00000533244 TPM4P67936 248 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 NOMO3P69849 1222 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 CDR2Q01850 454 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 NNTQ13423 1086 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 NR1I3Q14994 352 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 FBXO43Q4G163 708 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 CPXM2Q8N436 756 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 SLC20A1Q8WUM9 679 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 P2RY11Q96G91 374 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 STOML2Q9UJZ1 356 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 NAALADL1Q9UQQ1 740 aa21.34■■□□□ 1.01
CCS-208ENST00000533244 A0A0A0MRY4 1105 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 PAPSS2O95340 614 aaPredicted RBP21.33■■□□□ 1.01
CCS-208ENST00000533244 LATS1O95835 1130 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 SLC6A11P48066 632 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 SNX16P57768 344 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 FMO1Q01740 532 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 RING1Q06587 406 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 MESP2Q0VG99 397 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 TAF5Q15542 800 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 SYPL2Q5VXT5 272 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 FAM183BPQ6ZVS7 135 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 SLC26A9Q7LBE3 791 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 DENND1CQ8IV53 801 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 IPO4Q8TEX9 1081 aaKnown RBP21.33■■□□□ 1.01
CCS-208ENST00000533244 SLC2A13Q96QE2 648 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 PDCL3Q9H2J4 239 aa21.33■■□□□ 1.01
CCS-208ENST00000533244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.32■■□□□ 1
CCS-208ENST00000533244 CHURC1-FNTBB4DL54 471 aa21.32■■□□□ 1
CCS-208ENST00000533244 GFRA2O00451 464 aa21.32■■□□□ 1
CCS-208ENST00000533244 CACNG3O60359 315 aa21.32■■□□□ 1
CCS-208ENST00000533244 SERPINC1P01008 464 aa21.32■■□□□ 1
CCS-208ENST00000533244 IGLV3-25P01717 112 aa21.32■■□□□ 1
CCS-208ENST00000533244 CYP1A1P04798 512 aaPredicted RBP21.32■■□□□ 1
CCS-208ENST00000533244 SP9P0CG40 484 aa21.32■■□□□ 1
CCS-208ENST00000533244 TDGF1P13385 188 aa21.32■■□□□ 1
CCS-208ENST00000533244 CHKAP35790 457 aa21.32■■□□□ 1
CCS-208ENST00000533244 PLA2G5P39877 138 aa21.32■■□□□ 1
CCS-208ENST00000533244 CCR3P51677 355 aa21.32■■□□□ 1
CCS-208ENST00000533244 FANCCQ00597 558 aa21.32■■□□□ 1
CCS-208ENST00000533244 EIF4EBP2Q13542 120 aaPredicted RBP21.32■■□□□ 1
CCS-208ENST00000533244 ZNF528Q3MIS6 628 aa21.32■■□□□ 1
CCS-208ENST00000533244 EFHC1Q5JVL4 640 aa21.32■■□□□ 1
CCS-208ENST00000533244 ZDHHC17Q8IUH5 632 aa21.32■■□□□ 1
CCS-208ENST00000533244 ZNF397Q8NF99 534 aaPredicted RBP21.32■■□□□ 1
CCS-208ENST00000533244 BAP1Q92560 729 aa21.32■■□□□ 1
CCS-208ENST00000533244 NELL1Q92832 810 aa21.32■■□□□ 1
CCS-208ENST00000533244 SLC39A13Q96H72 371 aa21.32■■□□□ 1
CCS-208ENST00000533244 SERPINB11Q96P15 392 aa21.32■■□□□ 1
CCS-208ENST00000533244 PNKPQ96T60 521 aa21.32■■□□□ 1
CCS-208ENST00000533244 WDR35Q9P2L0 1181 aa21.32■■□□□ 1
CCS-208ENST00000533244 MYO6Q9UM54 1294 aa21.32■■□□□ 1
CCS-208ENST00000533244 GOLGA6L19H0YKK7 550 aa21.31■■□□□ 1
CCS-208ENST00000533244 K7EQS6 105 aa21.31■■□□□ 1
CCS-208ENST00000533244 HSF2BPO75031 334 aa21.31■■□□□ 1
CCS-208ENST00000533244 RNF40O75150 1001 aa21.31■■□□□ 1
CCS-208ENST00000533244 TULP3O75386 442 aa21.31■■□□□ 1
CCS-208ENST00000533244 PENKP01210 267 aaPredicted RBP21.31■■□□□ 1
CCS-208ENST00000533244 CHRM1P11229 460 aaPredicted RBP21.31■■□□□ 1
CCS-208ENST00000533244 TYRP14679 529 aa21.31■■□□□ 1
CCS-208ENST00000533244 SCNN1AP37088 669 aa21.31■■□□□ 1
CCS-208ENST00000533244 HARS2P49590 506 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms