RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SUZ12Q15022 739 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 SMAD1Q15797 465 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 ENOX2Q16206 610 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 DDR2Q16832 855 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 MIIPQ5JXC2 388 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 JADE1Q6IE81 842 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 GPR155Q7Z3F1 870 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 MARCH9Q86YJ5 346 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 LURAP1LQ8IV03 231 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZNF513Q8N8E2 541 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 HAPLN2Q9GZV7 340 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 GAREM1Q9H706 876 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 PRDM16Q9HAZ2 1276 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 CYP8B1Q9UNU6 501 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 DERAQ9Y315 318 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 PCDHGB2Q9Y5G2 931 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 A0A0B4J269 797 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 FAM149AA5PLN7 773 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 TBC1D3BA6NDS4 549 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 KIAA0391O15091 583 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 OGTO15294 1046 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 MATKP42679 507 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 KDSRQ06136 332 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 MESP2Q0VG99 397 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 TMEM132DQ14C87 1099 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 SDE2Q6IQ49 451 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 RHBDF2Q6PJF5 856 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 DBX2Q6ZNG2 339 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 TMC6Q7Z403 805 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 CBWD2Q8IUF1 395 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 VSTM4Q8IW00 320 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 NXPE2Q96DL1 559 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZDHHC4Q9NPG8 344 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 TMLHEQ9NVH6 421 aa11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-213ENST00000533149 BPTFQ12830 3046 aa11.96□□□□□ -0.5
TRAPPC4-213ENST00000533149 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 MAPK13O15264 365 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 TNFSF14O43557 240 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 CILPO75339 1184 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 ADH5P11766 374 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 KRT13P13646 458 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 CYP2F1P24903 491 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 MAOBP27338 520 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 NTSR1P30989 418 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 PBX1P40424 430 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 KCNC4Q03721 635 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 FKBP15Q5T1M5 1219 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 C12orf40Q86WS4 652 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 GPD1LQ8N335 351 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 DNASE2BQ8WZ79 361 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 BAP1Q92560 729 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 ACBD6Q9BR61 282 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 FAM213AQ9BRX8 229 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 IL21RQ9HBE5 538 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 KIAA1586Q9HCI6 787 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 TBC1D14Q9P2M4 693 aa11.95□□□□□ -0.5
TRAPPC4-213ENST00000533149 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZNF233A6NK53 670 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 MEI4A8MW99 385 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 KPNA7A9QM74 516 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 FAM189A1O60320 539 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 LDHAP00338 332 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 NDUFV2P19404 249 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 VAMP7P51809 220 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 MCCD1P59942 119 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 SLC7A9P82251 487 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZXDBP98169 803 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 GAD2Q05329 585 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 SNRNP35Q16560 246 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 HLA-BQ31612 363 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 SV2CQ496J9 727 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 DCAF17Q5H9S7 520 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 C6orf118Q5T5N4 469 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 TCERG1LQ5VWI1 586 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 BTBD8Q5XKL5 378 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 ASB7Q9H672 318 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 EHD2Q9NZN4 543 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 TRPM5Q9NZQ8 1165 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 DEC1Q9P2X7 70 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 FNDC3AQ9Y2H6 1198 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 C2CD2Q9Y426 696 aa11.94□□□□□ -0.5
TRAPPC4-213ENST00000533149 A0A1W2PQC6 194 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms