RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 LGR5O75473 907 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 TMCC1O94876 653 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 RFC1P35251 1148 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 COPAP53621 1224 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 FAM43BQ6ZT52 329 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 WDR75Q8IWA0 830 aaKnown RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 SHKBP1Q8TBC3 707 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 SPATA18Q8TC71 538 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 ACTRT2Q8TDY3 377 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 LENG1Q96BZ8 264 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 PCDHA10Q9Y5I2 948 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 STBD1O95210 358 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 SLC25A27O95847 323 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 LDHAP00338 332 aaKnown RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 CD48P09326 243 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 L1CAMP32004 1257 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 MYBPC3Q14896 1274 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 CCDC33Q8N5R6 958 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 NLRP4Q96MN2 994 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 SMYD3Q9H7B4 428 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 POPDC2Q9HBU9 364 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 ZC3H7BQ9UGR2 993 aaKnown RBP15.3■□□□□ 0.04
CAPN1-224ENST00000533129 GMEB1Q9Y692 573 aa15.3■□□□□ 0.04
CAPN1-224ENST00000533129 SF3B1O75533 1304 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■■■■ 68.7
CAPN1-224ENST00000533129 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 AVILO75366 819 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 ITGA2BP08514 1039 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 KCNA2P16389 499 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 TMEM259Q4ZIN3 620 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 SLFN12LQ6IEE8 588 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 KCTD6Q8NC69 237 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CMASQ8NFW8 434 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 KCNN1Q92952 543 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 ATP6V0A1Q93050 837 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 MPP4Q96JB8 637 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 HAPLN2Q9GZV7 340 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 POLR3FQ9H1D9 316 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 GALNT8Q9NY28 637 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CDH22Q9UJ99 828 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 MAD1L1Q9Y6D9 718 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 C15orf38-AP3S2A0A0A6YYH1 394 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 BTBD19C9JJ37 291 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CNMDO75829 334 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 RGS20O76081 388 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 PIGRP01833 764 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 SMIM18P0DKX4 95 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 KRT3P12035 628 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CLCN2P51788 898 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 NOMO1Q15155 1222 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 TRIP10Q15642 601 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 STXBP2Q15833 593 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 DARS2Q6PI48 645 aaKnown RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 ARPINQ7Z6K5 226 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 ICA1LQ8NDH6 482 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 PIWIL2Q8TC59 973 aaKnown RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 LZICQ8WZA0 190 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-224ENST00000533129 PREBQ9HCU5 417 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 GABBR1Q9UBS5 961 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CIDEBQ9UHD4 219 aa15.29■□□□□ 0.04
CAPN1-224ENST00000533129 CNTNAP2Q9UHC6 1331 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 LCTP09848 1927 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 NRLP54845 237 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 BMPR2Q13873 1038 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 RALGPS1Q5JS13 557 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 NDUFAF2Q8N183 169 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 MARVELD2Q8N4S9 558 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 JOSD2Q8TAC2 188 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 NMD3Q96D46 503 aaKnown RBP15.28■□□□□ 0.04
CAPN1-224ENST00000533129 SLC10A4Q96EP9 437 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 RSAD1Q9HA92 442 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 PAK5Q9P286 719 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 APOBEC2Q9Y235 224 aaKnown RBP15.28■□□□□ 0.04
CAPN1-224ENST00000533129 SPATA31C2B4DYI2 1134 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 RPL5P46777 297 aaKnown RBP15.28■□□□□ 0.04
CAPN1-224ENST00000533129 EPHB1P54762 984 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 FOLH1Q04609 750 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 STXBP5Q5T5C0 1151 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 FBXL19Q6PCT2 694 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 KIAA0319LQ8IZA0 1049 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 FAM96AQ9H5X1 160 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 PLAC1Q9HBJ0 212 aa15.28■□□□□ 0.04
CAPN1-224ENST00000533129 DENRO43583 198 aaKnown RBP15.27■□□□□ 0.04
CAPN1-224ENST00000533129 OR6B1O95007 311 aa15.27■□□□□ 0.04
CAPN1-224ENST00000533129 APOEP02649 317 aa15.27■□□□□ 0.04
CAPN1-224ENST00000533129 MYL4P12829 197 aa15.27■□□□□ 0.04
CAPN1-224ENST00000533129 RAG1P15918 1043 aa15.27■□□□□ 0.04
CAPN1-224ENST00000533129 ICAM3P32942 547 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms