RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CCINQ13939 588 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 EFHC1Q5JVL4 640 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 FSTL4Q6MZW2 842 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 CPA5Q8WXQ8 436 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 PLD4Q96BZ4 506 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 PRRX2Q99811 253 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 P2RY13Q9BPV8 354 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 EDEM3Q9BZQ6 932 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 TTYH3Q9C0H2 523 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 POPDC2Q9HBU9 364 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 ASNSD1Q9NWL6 643 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 AGO1Q9UL18 857 aaKnown RBP20.74■□□□□ 0.91
CPSF1-209ENST00000532725 ARIH1Q9Y4X5 557 aaPredicted RBP20.74■□□□□ 0.91
CPSF1-209ENST00000532725 MYOFQ9NZM1 2061 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 MUC6Q6W4X9 2439 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 ADH1CP00326 375 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 CORO1AP31146 461 aaKnown RBP20.73■□□□□ 0.91
CPSF1-209ENST00000532725 SLC6A11P48066 632 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 NOMO3P69849 1222 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 SLC6A3Q01959 620 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 ARID5AQ03989 594 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 GAD2Q05329 585 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 DGKKQ5KSL6 1271 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 OR6B2Q6IFH4 312 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 OLFML1Q6UWY5 402 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 FAM183BPQ6ZVS7 135 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 ERICH1Q86X53 443 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 DENND1CQ8IV53 801 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 PRSS33Q8NF86 280 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 DQX1Q8TE96 717 aaKnown RBP20.73■□□□□ 0.91
CPSF1-209ENST00000532725 CD101Q93033 1021 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 C18orf8Q96DM3 657 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 PCDHB18PQ96TA0 734 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 TRIM62Q9BVG3 475 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 RBM12Q9NTZ6 932 aaKnown RBP20.73■□□□□ 0.91
CPSF1-209ENST00000532725 IFNKQ9P0W0 207 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 CACNA1IQ9P0X4 2223 aa20.73■□□□□ 0.91
CPSF1-209ENST00000532725 MSI1O43347 362 aaKnown RBP20.72■□□□□ 0.91
CPSF1-209ENST00000532725 IGLV3-27P01718 113 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 ADH5P11766 374 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 FERP16591 822 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 GRSF1Q12849 480 aaKnown RBP eCLIP20.72■□□□□ 0.91
CPSF1-209ENST00000532725 TCF15Q12870 199 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 FIGNQ5HY92 759 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 NAA35Q5VZE5 725 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 MAMSTRQ6ZN01 415 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 ZDHHC17Q8IUH5 632 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
CPSF1-209ENST00000532725 SLC2A13Q96QE2 648 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 CHRDQ9H2X0 955 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 SYNCQ9H7C4 482 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 CACNA1HO95180 2353 aa20.72■□□□□ 0.91
CPSF1-209ENST00000532725 CAPN9O14815 690 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 HOXC11O43248 304 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 CCDC172P0C7W6 258 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 UNGP13051 313 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 DRD1P21728 446 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 HARS2P49590 506 aaKnown RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 RING1Q06587 406 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 EIF4EBP2Q13542 120 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 LRRC32Q14392 662 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 GAS6Q14393 721 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 TRIM72Q6ZMU5 477 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 SLC26A9Q7LBE3 791 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 C12orf40Q86WS4 652 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 XYLT1Q86Y38 959 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 C1orf210Q8IVY1 113 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 DEFB106AQ8N104 65 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 SYNPOQ8N3V7 929 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 RNF214Q8ND24 703 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 EZH1Q92800 747 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-209ENST00000532725 EXOC4Q96A65 974 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 P2RY11Q96G91 374 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 AGPAT1Q99943 283 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 NUP58Q9BVL2 599 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 AIPL1Q9NZN9 384 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 MARK1Q9P0L2 795 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 STOML2Q9UJZ1 356 aa20.71■□□□□ 0.91
CPSF1-209ENST00000532725 MIA3Q5JRA6 1907 aa20.7■□□□□ 0.91
CPSF1-209ENST00000532725 A0A0A0MRY4 1105 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 FAM170AA1A519 330 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 LRRC53A6NM62 1247 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 HSF2BPO75031 334 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 GRAP2O75791 330 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 EGFP01133 1207 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 IGLV3-25P01717 112 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 CHKAP35790 457 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 EIF2DP41214 584 aaKnown RBP20.7■□□□□ 0.9
CPSF1-209ENST00000532725 TBX4P57082 545 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 MTAPQ13126 283 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 ANO4Q32M45 955 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 C2CD6Q53TS8 623 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 DCAF6Q58WW2 860 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 TPGS1Q6ZTW0 290 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 TOGARAM2Q6ZUX3 1019 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 ETFBKMTQ8IXQ9 262 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 FAM217AQ8IXS0 508 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 ADAM32Q8TC27 787 aa20.7■□□□□ 0.9
CPSF1-209ENST00000532725 SLC39A13Q96H72 371 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms