RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TSC22D3Q99576 134 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 UNKQ9C0B0 810 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 IARS2Q9NSE4 1012 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 DCDC2Q9UHG0 476 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 IFRD1O00458 451 aaPredicted RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 HNRNPH2P55795 449 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 ANKS6Q68DC2 871 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 TMEM120BA0PK00 339 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 RECQL4O94761 1208 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SERPINF2P08697 491 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 CASKIN2Q8WXE0 1202 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SERPINB11Q96P15 392 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 EPN3Q9H201 632 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 MANSC1Q9H8J5 431 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 MPP6Q9NZW5 540 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 ACKR2O00590 384 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 ERVK-10P10266 1014 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 GPC1P35052 558 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 SCNN1GP51170 649 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 CHADLQ6NUI6 762 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 EME1Q96AY2 570 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 SERPINB12Q96P63 405 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 AGXT2Q9BYV1 514 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.02
PCDHA9-202ENST00000532602 AIM2O14862 343 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 MAPK7Q13164 816 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 LLGL2Q6P1M3 1020 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 RPAINQ86UA6 219 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 BTN2A2Q8WVV5 523 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 SMARCD1Q96GM5 515 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 ECSITQ9BQ95 431 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CCDC134Q9H6E4 229 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 RMND5AQ9H871 391 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 MEIS2O14770 477 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 PROSCO94903 275 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CYP2F1P24903 491 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 JADE3Q92613 823 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 RASSF10A6NK89 507 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 A8MX80 341 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 RBP1P09455 135 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 SLC29A2Q14542 456 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 PLCL1Q15111 1095 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 MARC1Q5VT66 337 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 SPOCD1Q6ZMY3 1216 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 EXD1Q8NHP7 514 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 OSCP1Q8WVF1 389 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 UBXN8O00124 270 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 JCHAINP01591 159 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 TBX4P57082 545 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 ZIM3Q96PE6 472 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 NFKBIZQ9BYH8 718 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 DMAP1Q9NPF5 467 aaPredicted RBP15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 APPL1Q9UKG1 709 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 MED1Q15648 1581 aaPredicted RBP15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 VGLL3A8MV65 326 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 SP100P23497 879 aaPredicted RBP15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CASP5P51878 434 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 SGCGQ13326 291 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CHI3L2Q15782 390 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CCDC85BQ15834 202 aaPredicted RBP15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 CHMP1BQ7LBR1 199 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 WDR48Q8TAF3 677 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 KRCC1Q9NPI7 259 aaPredicted RBP15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 BLOC1S4Q9NUP1 217 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
PCDHA9-202ENST00000532602 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 PCDH8O95206 1070 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 GLP2RO95838 553 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 CNTFP26441 200 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 YWHAQP27348 245 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 IRAK1BP1Q5VVH5 260 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 KIAA0319LQ8IZA0 1049 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 FBXO36Q8NEA4 188 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 CAMKK2Q96RR4 588 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 RAD54BQ9Y620 910 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 RAMP2O60895 175 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 IKBKEQ14164 716 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 CBWD6Q4V339 395 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 CBWD3Q5JTY5 395 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 CBWD5Q5RIA9 395 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 REXO1L1PQ8IX06 675 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 ZSWIM2Q8NEG5 633 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 TUBGCP3Q96CW5 907 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 GANQ9H2C0 597 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 LTN1O94822 1766 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 NFASCO94856 1347 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 FRMPD4Q14CM0 1322 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 ELNP15502 786 aa15.19■□□□□ 0.02
PCDHA9-202ENST00000532602 SCNN1BP51168 640 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms