RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SIN3BO75182 1162 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 FTLP02792 175 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 P4HBP07237 508 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SREBF1P36956 1147 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ST13P50502 369 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 BLVRAP53004 296 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 NLRP11P59045 1033 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 OTOAQ7RTW8 1153 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 NT5DC3Q86UY8 548 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 VSIG10LQ86VR7 867 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SHCBP1LQ9BZQ2 653 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ABHD16BQ9H3Z7 469 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 S100A14Q9HCY8 104 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 STARD7Q9NQZ5 370 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 CAPN8A6NHC0 703 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 PCP4L1A6NKN8 68 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 H3BNX3 289 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 K7ERI5 159 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 CLDN3O15551 220 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 INHAP05111 366 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 RALGDSQ12967 914 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 STX3Q13277 289 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 EDRF1Q3B7T1 1238 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 SYCP2LQ5T4T6 812 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 KCNK18Q7Z418 384 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 CCDC60Q8IWA6 550 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM84AQ96KN4 292 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM20AQ96MK3 541 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DEPDC7Q96QD5 511 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 OLFM1Q99784 485 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 TAS2R1Q9NYW7 299 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 ADA2Q9NZK5 511 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 TEKT2Q9UIF3 430 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 SIK3Q9Y2K2 1263 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 NEU2Q9Y3R4 380 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 SQORQ9Y6N5 450 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DUOX1Q9NRD9 1551 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 TM7SF2O76062 418 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 AMPD1P23109 780 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 ENTPD1P49961 510 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 VCPP55072 806 aaKnown RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 PSMC5P62195 406 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DLG4P78352 724 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 FCHO2Q0JRZ9 810 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 IFRD2Q12894 506 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 KCTD19Q17RG1 926 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 RNF180Q86T96 592 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 IRGQQ8WZA9 623 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 E2F7Q96AV8 911 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 ERLEC1Q96DZ1 483 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 POLR3FQ9H1D9 316 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 FBXO6Q9NRD1 293 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 SEPT10Q9P0V9 454 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 ROBO3Q96MS0 1386 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 AIM2O14862 343 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 EPHB6O15197 1021 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 ARIH2O95376 493 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 CDK4P11802 303 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 MYCLP1P12525 358 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 INSRRP14616 1297 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 CREB1P16220 341 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 CCND3P30281 292 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 ATXN3P54252 364 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 AQP4P55087 323 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DEFA1P59665 94 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DEFA3P59666 94 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 MAP3K10Q02779 954 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 GPS1Q13098 491 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DRAP1Q14919 205 aaPredicted RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 FSCN1Q16658 493 aaKnown RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 DGKDQ16760 1214 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 NOL9Q5SY16 702 aaKnown RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 RWDD4Q6NW29 188 aaKnown RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 EFCAB12Q6NXP0 572 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DEFB107AQ8IZN7 70 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 TAMM41Q96BW9 452 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 SDCCAG3Q96C92 435 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM111AQ96PZ2 611 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 HEPHQ9BQS7 1158 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC39A3Q9BRY0 314 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 IKZF4Q9H2S9 585 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 TRIM39Q9HCM9 518 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 NINJ2Q9NZG7 142 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 GIT1Q9Y2X7 761 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 WNK3Q9BYP7 1800 aa7□□□□□ -1.29
TGFBR3-209ENST00000532540 DDX60Q8IY21 1712 aaKnown RBP7□□□□□ -1.29
TGFBR3-209ENST00000532540 DENND3A2RUS2 1198 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 GOLGA8SH3BPF8 625 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 GOLGA8MH3BSY2 632 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 TM9SF1O15321 606 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 RNASEH1O60930 286 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 SYN1P17600 705 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 GSSP48637 474 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 AQP5P55064 265 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 ARPP19P56211 112 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 MYL7Q01449 175 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 GIT2Q14161 759 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 MAPK11Q15759 364 aa6.99□□□□□ -1.29
TGFBR3-209ENST00000532540 TCHHL1Q5QJ38 904 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms