RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MT-ND3P03897 115 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 CFIP05156 583 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 EIF2S1P05198 315 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 C8AP07357 584 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SPARCP09486 303 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 WEE2P0C1S8 567 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SPINK2P20155 84 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 PRKCHP24723 683 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SLC6A4P31645 630 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 GGT5P36269 586 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 GZMKP49863 264 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 MEOX1P50221 254 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 DGKEP52429 567 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 HK2P52789 917 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 CDH15P55291 814 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 PIGFQ07326 219 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 GOLGA8FQ08AF8 430 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 MYO1EQ12965 1108 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 DUSP8Q13202 625 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SMAD4Q13485 552 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 TNFAIP1Q13829 316 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 PLEKHN1Q494U1 663 aaPredicted RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 DNAJC21Q5F1R6 531 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 BMP2KLQ5H9B9 411 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF766Q5HY98 468 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 RAB41Q5JT25 222 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 UTP14CQ5TAP6 766 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 CACHD1Q5VU97 1274 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 OGFOD2Q6N063 350 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF529Q6P280 563 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 UBE2Q1Q7Z7E8 422 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 METTL23Q86XA0 190 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 RTKN2Q8IZC4 609 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 TDRD5Q8NAT2 981 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 FNIP1Q8TF40 1166 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 PGAP3Q96FM1 320 aaPredicted RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 RBM17Q96I25 401 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 NPAS1Q99742 590 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SLC25A18Q9H1K4 315 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 PLEKHA2Q9HB19 425 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SEMA4BQ9NPR2 832 aaPredicted RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 ADPRHL2Q9NX46 363 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 SLCO3A1Q9UIG8 710 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 CORO1CQ9ULV4 474 aaPredicted RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 AGAP1Q9UPQ3 857 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 DRG1Q9Y295 367 aaKnown RBP4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 KCNE2Q9Y6J6 123 aa4.66□□□□□ -1.66
AC055878.1-201ENST00000531858 CXorf49A8MYA2 514 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 TEX22C9J3V5 150 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 HRKO00198 91 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CD3EAPO15446 510 aaKnown RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ADAM20O43506 726 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 STX6O43752 255 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CER1O95813 267 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 EFEMP2O95967 443 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 WNT11O96014 354 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 HMGCRP04035 888 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ATP5BP06576 529 aaKnown RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CCDC175P0C221 793 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CYP2C8P10632 490 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 COX7A2P14406 83 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 DESP17661 470 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 HLA-DPA1P20036 260 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GCH1P30793 250 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PPARGP37231 505 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GDNFP39905 211 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ADCY8P40145 1251 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GP5P40197 560 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PDE6CP51160 858 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 HSD17B4P51659 736 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PTTG1IPP53801 180 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 HDAC4P56524 1084 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 LOXL3P58215 753 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CLRN1P58418 232 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 EIF4A1P60842 406 aaKnown RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 UBXN2AP68543 259 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 KRT17Q04695 432 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 TOP3AQ13472 1001 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 MORF4L2Q15014 288 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 RAB3GAP1Q15042 981 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PCOLCEQ15113 449 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 C2orf76Q3KRA6 126 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 LRRC24Q50LG9 513 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PARP10Q53GL7 1025 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 MFSD14BQ5SR56 506 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ERMARDQ5T6L9 678 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 IYDQ6PHW0 289 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 DCLRE1AQ6PJP8 1040 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM47EQ6ZV65 393 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 DNAJB7Q7Z6W7 309 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GALNT7Q86SF2 657 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 DNAAF5Q86Y56 855 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 TICAM1Q8IUC6 712 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 SPARTQ8N0X7 666 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 SCML4Q8N228 414 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 WDTC1Q8N5D0 677 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms