RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 PENKP01210 267 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 HMBSP08397 361 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 CORO1AP31146 461 aaKnown RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 CHKAP35790 457 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 PTGER3P43115 390 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 TKTL1P51854 596 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 DAB2IPQ5VWQ8 1189 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 PM20D1Q6GTS8 502 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 SLC36A4Q6YBV0 504 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 RSRC2Q7L4I2 434 aaKnown RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 ARMCX6Q7L4S7 300 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 SYT12Q8IV01 421 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 ERCC4Q92889 916 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 P2RY11Q96G91 374 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 TIGD1Q96MW7 591 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 GABRG3Q99928 467 aa17.65■□□□□ 0.42
CPSF1-207ENST00000531727 ARMCX3Q9UH62 379 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
CPSF1-207ENST00000531727 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.42
CPSF1-207ENST00000531727 SPTBN2O15020 2390 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 GFRA2O00451 464 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 XPO1O14980 1071 aaKnown RBP17.64■□□□□ 0.41
CPSF1-207ENST00000531727 ZBTB24O43167 697 aaPredicted RBP17.64■□□□□ 0.41
CPSF1-207ENST00000531727 AP5Z1O43299 807 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 ZBED1O96006 694 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 NDUFV2P19404 249 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 PMLP29590 882 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 DPP6P42658 865 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 BCAT1P54687 386 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 YWHAEP62258 255 aaKnown RBP17.64■□□□□ 0.41
CPSF1-207ENST00000531727 IRX4P78413 519 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 NUCB2P80303 420 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 PDE4CQ08493 712 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 BECN1Q14457 450 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 SGO2Q562F6 1265 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 TRIM61Q5EBN2 209 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 FYB2Q5VWT5 728 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 LYSMD4Q5XG99 296 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 PSAPL1Q6NUJ1 521 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 KIAA1211LQ6NV74 962 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 IPO4Q8TEX9 1081 aaKnown RBP17.64■□□□□ 0.41
CPSF1-207ENST00000531727 ULBP1Q9BZM6 244 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 TMEM74BQ9NUR3 256 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 MARCH2Q9P0N8 246 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 TSPAN16Q9UKR8 245 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
CPSF1-207ENST00000531727 STRIP2Q9ULQ0 834 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 SLC27A6Q9Y2P4 619 aa17.64■□□□□ 0.41
CPSF1-207ENST00000531727 TULP2O00295 520 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 CDX4O14627 284 aaPredicted RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 ZNF217O75362 1048 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 RPL6Q02878 288 aaKnown RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 BST2Q10589 180 aaKnown RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 LMAN2Q12907 356 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 PEAR1Q5VY43 1037 aaPredicted RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 BHLHA9Q7RTU4 235 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 UBR7Q8N806 425 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 METTL14Q9HCE5 456 aaKnown RBP17.63■□□□□ 0.41
CPSF1-207ENST00000531727 CACNA2D2Q9NY47 1150 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 HESX1Q9UBX0 185 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 PILRBQ9UKJ0 227 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 ANGPTL2Q9UKU9 493 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 RAD54BQ9Y620 910 aa17.63■□□□□ 0.41
CPSF1-207ENST00000531727 IGHV1OR15-9A0A0B4J2B8 117 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 SLC12A8A0AV02 714 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 PSMA7O14818 248 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 CD19P15391 556 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 ITPKAP23677 461 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 TBXAS1P24557 533 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-207ENST00000531727 HOXD12P35452 270 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 NOVA1P51513 510 aaKnown RBP17.62■□□□□ 0.41
CPSF1-207ENST00000531727 MFAP3P55082 362 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 STIM1Q13586 685 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 SLC23A3Q6PIS1 610 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 DENND1CQ8IV53 801 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 CPXM2Q8N436 756 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 NDRG1Q92597 394 aaKnown RBP17.62■□□□□ 0.41
CPSF1-207ENST00000531727 PLD4Q96BZ4 506 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 DHTKD1Q96HY7 919 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-207ENST00000531727 LRRC4Q9HBW1 653 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 OLA1Q9NTK5 396 aaKnown RBP17.62■□□□□ 0.41
CPSF1-207ENST00000531727 KIAA1257Q9ULG3 409 aa17.62■□□□□ 0.41
CPSF1-207ENST00000531727 WASH3PC4AMC7 463 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 NPC1O15118 1278 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 CYBBP04839 570 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 VDRP11473 427 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 FMO5P49326 533 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 SHC2P98077 582 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 ADIGQ0VDE8 80 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 LRMPQ12912 555 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 TRIP4Q15650 581 aaPredicted RBP17.61■□□□□ 0.41
CPSF1-207ENST00000531727 GEN1Q17RS7 908 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 FAM217AQ8IXS0 508 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 ELOA2Q8IYF1 753 aaPredicted RBP17.61■□□□□ 0.41
CPSF1-207ENST00000531727 UBA3Q8TBC4 463 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms