RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 PCDHB18PQ96TA0 734 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 OSBPL6Q9BZF3 934 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 POPDC2Q9HBU9 364 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 HBS1LQ9Y450 684 aaKnown RBP12.4□□□□□ -0.42
LTBP3-219ENST00000530990 ATG2BQ96BY7 2078 aa12.4□□□□□ -0.42
LTBP3-219ENST00000530990 CAPN9O14815 690 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 HSF2BPO75031 334 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ADH1CP00326 375 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 IGLV3-27P01718 113 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ADH5P11766 374 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 UNGP13051 313 aaPredicted RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 OPRD1P41143 372 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 GABRB2P47870 512 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SNX16P57768 344 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 PITX1P78337 314 aaPredicted RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SLC6A3Q01959 620 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 NR1H3Q13133 447 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 FZD5Q13467 585 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ASIC2Q16515 512 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SFMBT2Q5VUG0 894 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 MMS22LQ6ZRQ5 1243 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 C12orf40Q86WS4 652 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SLC30A5Q8TAD4 765 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 CLDN23Q96B33 292 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SLC2A13Q96QE2 648 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 NELL2Q99435 816 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 AGPAT1Q99943 283 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 C11orf70Q9BRQ4 267 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SPHK2Q9NRA0 654 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ASNSD1Q9NWL6 643 aa12.39□□□□□ -0.43
LTBP3-219ENST00000530990 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
LTBP3-219ENST00000530990 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 WDFY4Q6ZS81 3184 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 TRDMT1O14717 391 aaKnown RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 IRAK2O43187 625 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 HOXC11O43248 304 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 DAB1O75553 588 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 IGLV3-25P01717 112 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 GYPCP04921 128 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 TPM3P06753 285 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 GLI1P08151 1106 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CCDC172P0C7W6 258 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CHRNB1P11230 501 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 AMPD2Q01433 879 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CENPCQ03188 943 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CCINQ13939 588 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 DCAF6Q58WW2 860 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 TMEM196Q5HYL7 178 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 FAM102AQ5T9C2 384 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 FSTL4Q6MZW2 842 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 TMEM25Q86YD3 366 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 MSANTD4Q8NCY6 345 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 ZNF397Q8NF99 534 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 CD101Q93033 1021 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 C18orf8Q96DM3 657 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 P2RY11Q96G91 374 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 P2RY13Q9BPV8 354 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 NUP58Q9BVL2 599 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 DCLK3Q9C098 648 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
LTBP3-219ENST00000530990 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 ZNF510Q9Y2H8 683 aa12.38□□□□□ -0.43
LTBP3-219ENST00000530990 NEDD8-MDP1E9PL57 170 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 GOLGA8SH3BPF8 625 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 NCAM2O15394 837 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
LTBP3-219ENST00000530990 EGFP01133 1207 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 MMP8P22894 467 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 SCNN1AP37088 669 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 PRKCIP41743 596 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
LTBP3-219ENST00000530990 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
LTBP3-219ENST00000530990 SLC6A11P48066 632 aa12.37□□□□□ -0.43
LTBP3-219ENST00000530990 HARS2P49590 506 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms