RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 CRY2Q49AN0 593 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 TEDDM1Q5T9Z0 273 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ZNF551Q7Z340 670 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-213ENST00000530784 AMIGO2Q86SJ2 522 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ATG4AQ8WYN0 398 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 THUMPD2Q9BTF0 503 aaKnown RBP8.33□□□□□ -1.08
CSDE1-213ENST00000530784 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
CSDE1-213ENST00000530784 FAM204AQ9H8W3 233 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ARHGEF3Q9NR81 526 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 HACL1Q9UJ83 578 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ADAM21Q9UKJ8 722 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 RRP7AQ9Y3A4 280 aaKnown RBP8.33□□□□□ -1.08
CSDE1-213ENST00000530784 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 PASKQ96RG2 1323 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 GCOM1H8Y6P7 765 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-213ENST00000530784 SLC16A3O15427 465 aaKnown RBP8.32□□□□□ -1.08
CSDE1-213ENST00000530784 TLR5O60602 858 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 NXPH3O95157 252 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 MYL6BP14649 208 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 GPD1P21695 349 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 FBLP22087 321 aaKnown RBP8.32□□□□□ -1.08
CSDE1-213ENST00000530784 GPTP24298 496 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 EPHX2P34913 555 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 CCT8P50990 548 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 MYO1EQ12965 1108 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 ZIK1Q3SY52 487 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-213ENST00000530784 FAM153CQ494X1 144 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 TREML2Q5T2D2 321 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 GPC2Q8N158 579 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 MPP5Q8N3R9 675 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 MAML1Q92585 1016 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 SARAFQ96BY9 339 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 PLEKHF1Q96S99 279 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 PSMD1Q99460 953 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 MS4A7Q9GZW8 240 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-213ENST00000530784 CXorf36Q9H7Y0 433 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 CNTNAP1P78357 1384 aa8.32□□□□□ -1.08
CSDE1-213ENST00000530784 UBN2Q6ZU65 1347 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 SCN4AP35499 1836 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GOLGA6CA6NDK9 693 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GOLGA6BA6NDN3 693 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 MARCH6O60337 910 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 PROP1O75360 226 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 C1RP00736 705 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GOLGA6DP0CG33 693 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-213ENST00000530784 CD38P28907 300 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 LRPAP1P30533 357 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 SUMO3P55854 103 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-213ENST00000530784 SATB1Q01826 763 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 KRT17Q04695 432 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GRM3Q14832 879 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 SYCE2Q6PIF2 218 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GAS2L3Q86XJ1 694 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 GOLGA6AQ9NYA3 693 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 CPNE7Q9UBL6 633 aa8.31□□□□□ -1.08
CSDE1-213ENST00000530784 ADAMTSL1Q8N6G6 1762 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 NTSR2O95665 410 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 CSF1RP07333 972 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 IL6RP08887 468 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-213ENST00000530784 DRD4P21917 467 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 ALDH9A1P49189 494 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 SOX10P56693 466 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 NHLH1Q02575 133 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 RAB32Q13637 225 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 CCDC142Q17RM4 750 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 PARP10Q53GL7 1025 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 PLA1AQ53H76 456 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 SUSD4Q5VX71 490 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 PPP1R42Q7Z4L9 355 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 FAM156AQ8NDB6 213 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 TTC8Q8TAM2 541 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 GLG1Q92896 1179 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
CSDE1-213ENST00000530784 TSPYL4Q9UJ04 414 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 TPCN1Q9ULQ1 816 aa8.3□□□□□ -1.08
CSDE1-213ENST00000530784 FESP07332 822 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 NDUFB7P17568 137 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 DGKEP52429 567 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 C21orf58P58505 322 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 GFOD2Q3B7J2 385 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 MGAT5BQ3V5L5 792 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 DCAF12L1Q5VU92 463 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 CCDC149Q6ZUS6 474 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 SLC15A3Q8IY34 581 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 ZNF34Q8IZ26 560 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 SUCLG2Q96I99 432 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 TMX4Q9H1E5 349 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-213ENST00000530784 GLOD4Q9HC38 313 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 TBC1D30Q9Y2I9 924 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 COL4A5P29400 1685 aa8.29□□□□□ -1.08
CSDE1-213ENST00000530784 A1L4Q6 167 aa8.28□□□□□ -1.08
CSDE1-213ENST00000530784 TCERG1O14776 1098 aaKnown RBP8.28□□□□□ -1.08
CSDE1-213ENST00000530784 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms