RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 AMFRQ9UKV5 643 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 STAP1Q9ULZ2 295 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 MOCS2O96007 188 aaPredicted RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 F11P03951 625 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 RALAP11233 206 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 CASQ1P31415 396 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 PTPN9P43378 593 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 DEUP1Q05D60 604 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 KCNC3Q14003 757 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 PIGHQ14442 188 aaPredicted RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 TEAD2Q15562 447 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 PABPC1LQ4VXU2 614 aaKnown RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 PDZD4Q76G19 769 aaPredicted RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 SLFN11Q7Z7L1 901 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 ARHGAP18Q8N392 663 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 EFHBQ8N7U6 833 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 MAB21L3Q8N8X9 362 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 SHKBP1Q8TBC3 707 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 FNIP1Q8TF40 1166 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 HSPH1Q92598 858 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 RNF34Q969K3 372 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 GCNAQ96QF7 691 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 SLITRK6Q9H5Y7 841 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.63
SOX6-213ENST00000530378 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 UXTQ9UBK9 157 aaPredicted RBP11.1□□□□□ -0.63
SOX6-213ENST00000530378 ASB3Q9Y575 518 aa11.1□□□□□ -0.63
SOX6-213ENST00000530378 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 PI4K2BG5E9Z4 385 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 COCHO43405 550 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SRGAP2O75044 1071 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 RNF8O76064 485 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 HNRNPA1P09651 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
SOX6-213ENST00000530378 CEBPBP17676 345 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 PTPN2P17706 415 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 MEI1Q5TIA1 1274 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 AADACL2Q6P093 401 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ARL14EPQ8N8R7 260 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 PDZD8Q8NEN9 1154 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 CDCA3Q99618 268 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 NAPGQ99747 312 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 TLR10Q9BXR5 811 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ZDHHC7Q9NXF8 308 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 MARCH2Q9P0N8 246 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 CTAGE9A4FU28 777 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 KCNK3O14649 394 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 PRPSAP2O60256 369 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 KRT1P04264 644 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 CKMP06732 381 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 MBL2P11226 248 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 MAN1A1P33908 653 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 RDXP35241 583 aaKnown RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 PSEN1P49768 467 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 GPR158Q5T848 1215 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 ITFG1Q8TB96 612 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 ALG3Q92685 438 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 CEP295NLQ96MC4 621 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 RNF38Q9H0F5 515 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
SOX6-213ENST00000530378 DZANK1Q9NVP4 752 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 CLIC5Q9NZA1 410 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 DPP7Q9UHL4 492 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 USP18Q9UMW8 372 aa11.09□□□□□ -0.63
SOX6-213ENST00000530378 DDX3YO15523 660 aaKnown RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 IRAK2O43187 625 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 MOSPD3O75425 235 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 SRGAP2BP0DMP2 458 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 DESP17661 470 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 CDC25CP30307 473 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 HOXA9P31269 272 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 KCNQ1P51787 676 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 CBX2Q14781 532 aaPredicted RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 CA9Q16790 459 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 DCAF12L1Q5VU92 463 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 CYP4V2Q6ZWL3 525 aaPredicted RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 ARCQ7LC44 396 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 PYROXD2Q8N2H3 581 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms