RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 KLHL11Q9NVR0 708 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 PCDHGB6Q9Y5F9 930 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
SVIP-204ENST00000530199 PLXNA4Q9HCM2 1894 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 GOLIM4O00461 696 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 LAMTOR5O43504 91 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
SVIP-204ENST00000530199 ECHS1P30084 290 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 HOXC8P31273 242 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 SLC6A9P48067 706 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 SESN2P58004 480 aaPredicted RBP7.75□□□□□ -1.17
SVIP-204ENST00000530199 DLG4P78352 724 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 MLANAQ16655 118 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 RNF220Q5VTB9 566 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 LAIR1Q6GTX8 287 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 XRRA1Q6P2D8 792 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 PARD3BQ8TEW8 1205 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 GJA10Q969M2 543 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 GFM2Q969S9 779 aaKnown RBP7.75□□□□□ -1.17
SVIP-204ENST00000530199 CDK5RAP3Q96JB5 506 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 HNRNPABQ99729 332 aaKnown RBP7.75□□□□□ -1.17
SVIP-204ENST00000530199 ARPC5LQ9BPX5 153 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 SEMA4GQ9NTN9 838 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 TDP1Q9NUW8 608 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 NYAP2Q9P242 653 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 TAGLN3Q9UI15 199 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 SIK3Q9Y2K2 1263 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 PMF1-BGLAPU3KQ54 211 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 DENND4AQ7Z401 1863 aa7.75□□□□□ -1.17
SVIP-204ENST00000530199 ADAMTS20P59510 1910 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 GREB1LQ9C091 1923 aaPredicted RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 A0A088AWK7 358 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 LRRC10BA6NIK2 292 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 DAPK3O43293 454 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 NARSO43776 548 aaKnown RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 ARIH2O95376 493 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CYP2D6P10635 497 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 ZNF28P17035 718 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 HK3P52790 923 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CDC42EP1Q00587 391 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 ARHGAP1Q07960 439 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CNN3Q15417 329 aaKnown RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 CCDC157Q569K6 752 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 SWSAP1Q6NVH7 229 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CLEC14AQ86T13 490 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 TMEFF1Q8IYR6 380 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 FBXO15Q8NCQ5 510 aaPredicted RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CLPTM1LQ96KA5 538 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 BBC3Q96PG8 261 aaPredicted RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 DMRTA2Q96SC8 542 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 GPR20Q99678 358 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 CRNKL1Q9BZJ0 848 aaKnown RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 MANSC1Q9H8J5 431 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 SPATA6Q9NWH7 488 aaPredicted RBP7.74□□□□□ -1.17
SVIP-204ENST00000530199 LZTS1Q9Y250 596 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 PTPRCP08575 1304 aa7.74□□□□□ -1.17
SVIP-204ENST00000530199 PATJQ8NI35 1801 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 LRRC14BA6NHZ5 514 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 IDH1O75874 414 aaKnown RBP7.73□□□□□ -1.17
SVIP-204ENST00000530199 FGF18O76093 207 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 KCNK5O95279 499 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 GH1P01241 217 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 UBTFL1P0CB47 393 aaPredicted RBP7.73□□□□□ -1.17
SVIP-204ENST00000530199 ALAS1P13196 640 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 PEX2P28328 305 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 SERPINB3P29508 390 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 MAGEA9P43362 315 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 AK2P54819 239 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 STARD6P59095 220 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 CSTF1Q05048 431 aaKnown RBP7.73□□□□□ -1.17
SVIP-204ENST00000530199 CCDC158Q5M9N0 1113 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 TTC39AQ5SRH9 613 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 C10orf62Q5T681 223 aaPredicted RBP7.73□□□□□ -1.17
SVIP-204ENST00000530199 MAEAQ7L5Y9 396 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 CELF5Q8N6W0 485 aaKnown RBP7.73□□□□□ -1.17
SVIP-204ENST00000530199 C3orf20Q8ND61 904 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 FNIP1Q8TF40 1166 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 RAB23Q9ULC3 237 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 CA14Q9ULX7 337 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 HDAC5Q9UQL6 1122 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 POLHQ9Y253 713 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 DAAM1Q9Y4D1 1078 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 AKAP13Q12802 2813 aa7.73□□□□□ -1.17
SVIP-204ENST00000530199 PLA2G6O60733 806 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 RPL13P26373 211 aaKnown RBP7.72□□□□□ -1.17
SVIP-204ENST00000530199 RAB1AP62820 205 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 TARDBPQ13148 414 aaKnown RBP eCLIP7.72□□□□□ -1.17
SVIP-204ENST00000530199 BAATQ14032 418 aaPredicted RBP7.72□□□□□ -1.17
SVIP-204ENST00000530199 NONOQ15233 471 aaKnown RBP eCLIP7.72□□□□□ -1.17
SVIP-204ENST00000530199 C12orf60Q5U649 245 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 TOGARAM2Q6ZUX3 1019 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 LARP4Q71RC2 724 aaKnown RBP eCLIP7.72□□□□□ -1.17
SVIP-204ENST00000530199 FAM160B2Q86V87 743 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 GMCL1P1Q8NEA9 526 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 DNERQ8NFT8 737 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms