RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 NTSR2O95665 410 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 CER1O95813 267 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 MT-CO3P00414 261 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 NPPBP16860 134 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 DNASE1L3Q13609 305 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 SEC23BQ15437 767 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 C16orf89Q6UX73 402 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 ZNF66Q6ZN08 573 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 C12orf76Q8N812 135 aaPredicted RBP5.4□□□□□ -1.54
CTR9-204ENST00000529355 PNPLA1Q8N8W4 532 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 PNLDC1Q8NA58 520 aaKnown RBP5.4□□□□□ -1.54
CTR9-204ENST00000529355 DAZAP1Q96EP5 407 aaKnown RBP5.4□□□□□ -1.54
CTR9-204ENST00000529355 SH2D3AQ9BRG2 576 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 PCGF6Q9BYE7 350 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 CCDC187A0A096LP49 1063 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 M0R3H8 397 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 CLIC1O00299 241 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 TMPRSS11DO60235 418 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
CTR9-204ENST00000529355 ITGA5P08648 1049 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 TMIGD3P0DMS9 266 aaPredicted RBP5.39□□□□□ -1.55
CTR9-204ENST00000529355 CHKAP35790 457 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 PNLIPRP1P54315 467 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 SOX10P56693 466 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 OS9Q13438 667 aaPredicted RBP5.39□□□□□ -1.55
CTR9-204ENST00000529355 PTK2BQ14289 1009 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 MFSD13AQ14CX5 517 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 BTBD16Q32M84 506 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 ZACNQ401N2 412 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 ERAP2Q6P179 960 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 PGBD2Q6P3X8 592 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 SERPINA13PQ6UXR4 307 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 ZNF804AQ7Z570 1209 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 KRT73Q86Y46 540 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.39□□□□□ -1.55
CTR9-204ENST00000529355 FAM71BQ8TC56 605 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 SLC22A17Q8WUG5 538 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 VPS50Q96JG6 964 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 MECRQ9BV79 373 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 LRFN1Q9P244 771 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
CTR9-204ENST00000529355 PRRT4C9JH25 899 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 ACKR2O00590 384 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 FCHO1O14526 889 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 CTIFO43310 598 aaKnown RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 RPP40O75818 363 aaKnown RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 AKT1P31749 480 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 SERPINF1P36955 418 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 ELLP55199 621 aaPredicted RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 CFHR3Q02985 330 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 SEMA3BQ13214 749 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 SLC14A1Q13336 389 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 FAM187BQ17R55 369 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 CCDC38Q502W7 563 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 SULT6B1Q6IMI4 303 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 MTHFD1LQ6UB35 978 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 MYLK4Q86YV6 388 aaPredicted RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 CLASRPQ8N2M8 674 aaKnown RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 FAM71DQ8N9W8 422 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 CRAMP1Q96RY5 1269 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 SORBS1Q9BX66 1292 aaKnown RBP5.38□□□□□ -1.55
CTR9-204ENST00000529355 SNX15Q9NRS6 342 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 FZD4Q9ULV1 537 aa5.38□□□□□ -1.55
CTR9-204ENST00000529355 KIF28PB7ZC32 967 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 NBNO60934 754 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 PROP1O75360 226 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 SKAP2O75563 359 aaPredicted RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 GCATO75600 419 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 KAT7O95251 611 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 CSTBP04080 98 aaKnown RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 MPGP29372 298 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 GSTM5P46439 218 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 FAM3BP58499 235 aaPredicted RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 ICA1Q05084 483 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 CCDC15Q0P6D6 951 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 ARL6IP4Q66PJ3 421 aaKnown RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 RINT1Q6NUQ1 792 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 TMEM65Q6PI78 240 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 SUGP1Q8IWZ8 645 aaKnown RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 SCAMP5Q8TAC9 235 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 RMDN3Q96TC7 470 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 MLXIPLQ9NP71 852 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 ADARB2Q9NS39 739 aaKnown RBP5.37□□□□□ -1.55
CTR9-204ENST00000529355 ABHD10Q9NUJ1 306 aa5.37□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A18PA6NE21 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A16PA6NEW6 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 CGB1A6NKQ9 187 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A9PA6NNJ1 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A5PA8MXJ8 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 H7C1Q1 480 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A15PP0C7V4 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 FAM90A14PP0C7W9 464 aa5.36□□□□□ -1.55
CTR9-204ENST00000529355 CYP2A6P11509 494 aaPredicted RBP5.36□□□□□ -1.55
CTR9-204ENST00000529355 VEGFAP15692 232 aaPredicted RBP5.36□□□□□ -1.55
CTR9-204ENST00000529355 ZNF37AP17032 561 aaPredicted RBP5.36□□□□□ -1.55
CTR9-204ENST00000529355 TXNL4AP83876 142 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms