RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SIMC1Q8NDZ2 872 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ZNF384Q8TF68 577 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 SGCZQ96LD1 299 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 BBC3Q96PG8 261 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ELAC2Q9BQ52 826 aaKnown RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 AIFM2Q9BRQ8 373 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ALG13Q9NP73 1137 aaKnown RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 KCTD5Q9NXV2 234 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 FNIP2Q9P278 1114 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 LRIT1Q9P2V4 623 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 DNMT3BQ9UBC3 853 aaKnown RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 CORO2BQ9UQ03 480 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 SSX2IPQ9Y2D8 614 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 CARMIL3Q8ND23 1372 aa5.65□□□□□ -1.51
CSDE1-212ENST00000529046 AREL1O15033 823 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 CAMTA2O94983 1202 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 A1BGP04217 495 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 CSF1RP07333 972 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 ANXA2P07355 339 aaKnown RBP5.64□□□□□ -1.51
CSDE1-212ENST00000529046 PARP1P09874 1014 aaKnown RBP5.64□□□□□ -1.51
CSDE1-212ENST00000529046 RHBDL3P58872 404 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 LILRA4P59901 499 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 MRPS35P82673 323 aaKnown RBP5.64□□□□□ -1.51
CSDE1-212ENST00000529046 MYO1EQ12965 1108 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 LONRF1Q17RB8 773 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 PLA1AQ53H76 456 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 DGKKQ5KSL6 1271 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 VPS53Q5VIR6 699 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 TBC1D9BQ66K14 1250 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 CATSPERGQ6ZRH7 1159 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 C16orf71Q8IYS4 520 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-212ENST00000529046 SDR16C5Q8N3Y7 309 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 VGLL2Q8N8G2 317 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 ATP11CQ8NB49 1132 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 DEPTORQ8TB45 409 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 LPIN2Q92539 896 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 ZNF764Q96H86 408 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-212ENST00000529046 TTYH3Q9C0H2 523 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 PRDM13Q9H4Q3 707 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 SERHLQ9NQF3 203 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 DKK4Q9UBT3 224 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 TLK1Q9UKI8 766 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
CSDE1-212ENST00000529046 LOC102723971A0A1B0GUV8 181 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 POM121BA6NF01 834 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 KCNQ3O43525 872 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PPP3CBP16298 524 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 FGFR2P21802 821 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 FBLP22087 321 aaKnown RBP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 TNFSF4P23510 183 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PPP2R1AP30153 589 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 CD6P30203 668 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PRKAR2BP31323 418 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 STT3AP46977 705 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 ITIH3Q06033 890 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PTPRRQ15256 657 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 MGAT5BQ3V5L5 792 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 ICE2Q659A1 982 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PRR5LQ6MZQ0 368 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 UNC13DQ70J99 1090 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 DTX2Q86UW9 622 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 C2CD5Q86YS7 1000 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 SLC30A5Q8TAD4 765 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 ACTRT2Q8TDY3 377 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PNISRQ8TF01 805 aaKnown RBP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 MASTLQ96GX5 879 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 RIPOR3Q96MK2 946 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 MYD88Q99836 296 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 DUSP26Q9BV47 211 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 PNNQ9H307 717 aaKnown RBP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 R3HDMLQ9H3Y0 253 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 CXorf36Q9H7Y0 433 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 NDRG4Q9ULP0 352 aaKnown RBP5.63□□□□□ -1.51
CSDE1-212ENST00000529046 USP16Q9Y5T5 823 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 SNX13Q9Y5W8 968 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 CDY1Q9Y6F8 540 aa5.63□□□□□ -1.51
CSDE1-212ENST00000529046 SIPA1L3O60292 1781 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 DLEC1Q9Y238 1755 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 SBF1O95248 1867 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 A0A087WZ62 844 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 ERVV-1B6SEH8 477 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 F5H697 171 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PEX1O43933 1283 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 BTF3P20290 206 aaKnown RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 ACVR2AP27037 513 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 SERPINB3P29508 390 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 CARSP49589 748 aaKnown RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PRELPP51888 382 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 NXPH1P58417 271 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 SIM1P81133 766 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 MORC3Q14149 939 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 SF3B3Q15393 1217 aaKnown RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 TAF7Q15545 349 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 INSCQ1MX18 579 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 IZUMO3Q5VZ72 239 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms