RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 LHX1P48742 406 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 DHPSP49366 369 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 AP3M2P53677 418 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ATXN3P54252 364 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 EPHB3P54753 998 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 MYL6P60660 151 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CXADRP78310 365 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 MYL7Q01449 175 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 TSPY1Q01534 308 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 TLE3Q04726 772 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 FCHO2Q0JRZ9 810 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 WDR72Q3MJ13 1102 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 COBLL1Q53SF7 1204 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 INTS6LQ5JSJ4 861 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CYP4A22Q5TCH4 519 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF658Q5TYW1 1059 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CEP135Q66GS9 1140 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 FAM171BQ6P995 826 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 SV2AQ7L0J3 742 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 DNAJB7Q7Z6W7 309 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ELMOD1Q8N336 334 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 LEMD2Q8NC56 503 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PSMG2Q969U7 264 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CCDC34Q96HJ3 373 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ZSWIM3Q96MP5 696 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PSMG3-AS1Q96PY0 264 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 GSDMAQ96QA5 445 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 LPIN3Q9BQK8 851 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 MRPL45Q9BRJ2 306 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CAPN10Q9HC96 672 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 CRTAC1Q9NQ79 661 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 FSCN3Q9NQT6 498 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ASAH2Q9NR71 780 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 GTF3C4Q9UKN8 822 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 SLC6A14Q9UN76 642 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ASB3Q9Y575 518 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PCDHB5Q9Y5E4 795 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PCNX1Q96RV3 2341 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 SETD2Q9BYW2 2564 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 A0A1W2PRU2 124 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 IKBKBO14920 756 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 ATP2C2O75185 946 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 TACC1O75410 805 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 FAM163BP0C2L3 166 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 HMGA1P17096 107 aaKnown RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 ATICP31939 592 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 GPR15P49685 360 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 ADAM9Q13443 819 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 TRPC3Q13507 836 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 TEAD2Q15562 447 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 NFE2Q16621 373 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 EDRF1Q3B7T1 1238 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 MGAT5BQ3V5L5 792 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 ZACNQ401N2 412 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 TMEM196Q5HYL7 178 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 FSTL4Q6MZW2 842 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 LYPD4Q6UWN0 246 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 GAREM2Q75VX8 874 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 SYT13Q7L8C5 426 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 ELMO3Q96BJ8 720 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 NXPE2Q96DL1 559 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 RSPRY1Q96DX4 576 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 LIN37Q96GY3 246 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 SEPT5Q99719 369 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 ARID3AQ99856 593 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 GTPBP2Q9BX10 602 aaKnown RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 RMND1Q9NWS8 449 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 ABI2Q9NYB9 513 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 CHMP5Q9NZZ3 219 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 PILRBQ9UKJ0 227 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 INVSQ9Y283 1065 aa9□□□□□ -0.97
SSBP3-212ENST00000528930 DNMT3AQ9Y6K1 912 aaPredicted RBP9□□□□□ -0.97
SSBP3-212ENST00000528930 DENND4CQ5VZ89 1909 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 F8P00451 2351 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 HEPACAM2A8MVW5 462 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PHACTR2O75167 634 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 SMC2O95347 1197 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 SERPINF2P08697 491 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PDGFRBP09619 1106 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 HLA-EP13747 358 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 BMP6P22004 513 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 CYP2F1P24903 491 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 RPL13P26373 211 aaKnown RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PCSK1P29120 753 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 GNL1P36915 607 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 VAMP7P51809 220 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PMS1P54277 932 aaKnown RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PSMC1P62191 440 aaKnown RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 ENPEPQ07075 957 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PPP3CAQ08209 521 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 BIRC3Q13489 604 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 NCOA4Q13772 614 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 CFAP221Q4G0U5 840 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms