RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 M0QYT0 321 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 KCNN4O15554 427 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 STK10O94804 968 aaKnown RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 POMCP01189 267 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 LTFP02788 710 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 CHN1P15882 459 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 SLC18A1P54219 525 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 BASP1P80723 227 aaKnown RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 SCAPQ12770 1279 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 KCNJ11Q14654 390 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 TTC19Q6DKK2 380 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 C4orf50Q6ZRC1 276 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 PALM2Q8IXS6 379 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 C3orf58Q8NDZ4 430 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 PWWP2AQ96N64 755 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 SELENOSQ9BQE4 189 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 ULBP1Q9BZM6 244 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 BRD8Q9H0E9 1235 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 ELAC1Q9H777 363 aaKnown RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 VPS37BQ9H9H4 285 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 NAALADL1Q9UQQ1 740 aa15.32■□□□□ 0.04
ECHDC1-220ENST00000528402 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 ARVCFO00192 962 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 NCAM2O15394 837 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 RBL1P28749 1068 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 CYP2C18P33260 490 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 ADRA1BP35368 520 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 FDFT1P37268 417 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 SARNPP82979 210 aaKnown RBP15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 CDK16Q00536 496 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 PDK1Q15118 436 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 OVOS1Q6IE37 1185 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 CD300LGQ6UXG3 332 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 CCDC185Q8N715 623 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 ZMIZ2Q8NF64 920 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 QKIQ96PU8 341 aaKnown RBP eCLIP15.31■□□□□ 0.043e-7■■■■□ 24.7
ECHDC1-220ENST00000528402 PPANQ9NQ55 473 aaKnown RBP15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 EURLQ9NYK6 297 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 USP3Q9Y6I4 520 aa15.31■□□□□ 0.04
ECHDC1-220ENST00000528402 TSC2P49815 1807 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 TRPA1O75762 1119 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 DGKIO75912 1065 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 TPSB2P20231 275 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 NDUFV1P49821 464 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 GEMIN4P57678 1058 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 BFSP2Q13515 415 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 TPSAB1Q15661 275 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 LHX8Q68G74 356 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 ARHGEF18Q6ZSZ5 1173 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 DCP1BQ8IZD4 617 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 ZNF473Q8WTR7 871 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 TFB1MQ8WVM0 346 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 MAML1Q92585 1016 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 MYLPFQ96A32 169 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 PKMYT1Q99640 499 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 RTP3Q9BQQ7 232 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 RSPH14Q9UHP6 348 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 PHF24Q9UPV7 400 aa15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 TIMM13Q9Y5L4 95 aaPredicted RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 ATXN2Q99700 1313 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-220ENST00000528402 KBTBD13C9JR72 458 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 CCT5P48643 541 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 CAP1Q01518 475 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 DSC1Q08554 894 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 ANKRD22Q5VYY1 191 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 TRAF7Q6Q0C0 670 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 KCNT2Q6UVM3 1135 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 FAM131BQ86XD5 332 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 CCDC13Q8IYE1 715 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 SGSM3Q96HU1 749 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 ACSS3Q9H6R3 686 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 C10orf88Q9H8K7 445 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 SSU72Q9NP77 194 aaKnown RBP15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 RAB6BQ9NRW1 208 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
ECHDC1-220ENST00000528402 FRMPD3Q5JV73 1810 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms