RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 ATG16L1Q676U5 607 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 ALKAL1Q6UXT8 129 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 UNC5AQ6ZN44 842 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 STRADAQ7RTN6 431 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 FAM13CQ8NE31 585 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 RAB3IL1Q8TBN0 382 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 FBXO41Q8TF61 875 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SKA1Q96BD8 255 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SIGLEC10Q96LC7 697 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 HSFY1Q96LI6 401 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 TSPAN18Q96SJ8 248 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 B3GNT5Q9BYG0 378 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 KCNK13Q9HB14 408 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 PLAC1Q9HBJ0 212 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 ALG13Q9NP73 1137 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 RCOR3Q9P2K3 495 aaPredicted RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 UBQLN1Q9UMX0 589 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 AP4E1Q9UPM8 1137 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CXorf49A8MYA2 514 aaPredicted RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 I3L4J1 428 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 METTL18O95568 372 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CD4P01730 458 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 MMP3P08254 477 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SLC8A3P57103 927 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 GBE1Q04446 702 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CDK18Q07002 472 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SEMA5AQ13591 1074 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 KRT72Q14CN4 511 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 KCNT2Q6UVM3 1135 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 C7orf31Q8N865 590 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CFAP61Q8NHU2 1237 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 TMEM120AQ9BXJ8 343 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 MTMR10Q9NXD2 777 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SLC5A4Q9NY91 659 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 PCDHA11Q9Y5I1 949 aa11.18□□□□□ -0.62
PTPMT1-204ENST00000527079 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 PIRO00625 290 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 RFPL1O75677 317 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 MLNP12872 115 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 CALB2P22676 271 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 EPHB2P29323 1055 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 GJA5P36382 358 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 FDFT1P37268 417 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 PNPLA4P41247 253 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 ZBTB16Q05516 673 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 DBN1Q16643 649 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 ANKRD20A3Q5VUR7 823 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 TIFABQ6ZNK6 161 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 ZNF534Q76KX8 674 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 PTCD3Q96EY7 689 aaKnown RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 NSL1Q96IY1 281 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 CXCL16Q9H2A7 254 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 RNF181Q9P0P0 153 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 MAD1L1Q9Y6D9 718 aa11.17□□□□□ -0.62
PTPMT1-204ENST00000527079 DIAPH2O60879 1101 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 DGKIO75912 1065 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 MAP3K6O95382 1288 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 TFE3P19532 575 aaPredicted RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 AXLP30530 894 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 CRHR1P34998 444 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 ARL4AP40617 200 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 MRPS5P82675 430 aaKnown RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 EFHC1Q5JVL4 640 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 ENDOVQ8N8Q3 282 aaKnown RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 TFB1MQ8WVM0 346 aaKnown RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 HTR3CQ8WXA8 447 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 C18orf25Q96B23 403 aaPredicted RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 FERMT1Q9BQL6 677 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 TRIM6Q9C030 488 aaPredicted RBP11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 DPEP3Q9H4B8 488 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 SMYD2Q9NRG4 433 aa11.16□□□□□ -0.62
PTPMT1-204ENST00000527079 KCNK4Q9NYG8 393 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms