RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 DDX1Q92499 740 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 ATP2A3Q93084 1043 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 P2RY13Q9BPV8 354 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 MIS12Q9H081 205 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 LRRC4Q9HBW1 653 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 SPATA6Q9NWH7 488 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
CCDC90B-208ENST00000527025 E5RJQ4 531 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 K7ESF4 209 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PES1O00541 588 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 TEX33O43247 280 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 AP5Z1O43299 807 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 MSI1O43347 362 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PBX1P40424 430 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 JAM2P57087 298 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PITX1P78337 314 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 FANCCQ00597 558 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 RAPGEF1Q13905 1077 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 EMC10Q5UCC4 262 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 SYPL2Q5VXT5 272 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 TMEM110Q86TL2 294 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 ETFBKMTQ8IXQ9 262 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 SCML4Q8N228 414 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 CPA6Q8N4T0 437 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 KIAA1958Q8N8K9 716 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 NAT16Q8N8M0 369 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 NELL1Q92832 810 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 ATOH1Q92858 354 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 FAM122AQ96E09 287 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 HSFY1Q96LI6 401 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 ERGIC2Q96RQ1 377 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PRRX2Q99811 253 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 NACA2Q9H009 215 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 ZDHHC4Q9NPG8 344 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 CNGB3Q9NQW8 809 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PRMT8Q9NR22 394 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 MARCH2Q9P0N8 246 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 RASAL2Q9UJF2 1139 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 AGO1Q9UL18 857 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 CLEC4EQ9ULY5 219 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 NAALADL1Q9UQQ1 740 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 MRPS17Q9Y2R5 130 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 R4GN57 208 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 ZNF292O60281 2723 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
CCDC90B-208ENST00000527025 A0A0A0MRY4 1105 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SLC12A8A0AV02 714 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 F8VZ95 297 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 GOLGA6L19H0YKK7 550 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 RNF40O75150 1001 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NFATC1O95644 943 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CYP11B1P15538 503 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CHRNB2P17787 502 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NBL1P41271 181 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SLC8A3P57103 927 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 TPM4P67936 248 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CSTF1Q05048 431 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 PDCLQ13371 301 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NR1I3Q14994 352 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SYCP1Q15431 976 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 STILQ15468 1287 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 BTBD8Q5XKL5 378 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 FMNL3Q8IVF7 1028 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SIX6OS1Q8N1H7 587 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 ANKRD20A12PQ8NF67 263 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 ADAM32Q8TC27 787 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 STK32AQ8WU08 396 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SLC20A1Q8WUM9 679 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CD101Q93033 1021 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 MYEOVQ96EZ4 313 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 MSANTD3Q96H12 275 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 STK33Q9BYT3 514 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NLRC4Q9NPP4 1024 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SPHK2Q9NRA0 654 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 ST7Q9NRC1 585 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CALCOCO1Q9P1Z2 691 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 TBC1D14Q9P2M4 693 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 NOCTQ9UK39 431 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 SH3BP1Q9Y3L3 701 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 CFAP54Q96N23 3096 aa9.27□□□□□ -0.93
CCDC90B-208ENST00000527025 GOLGA6L7A0A1B0GV03 622 aa9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 A0A1W2PQC6 194 aa9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 GFRA2O00451 464 aa9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 SLC9A3R1O14745 358 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 NCAM2O15394 837 aa9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 HOXC11O43248 304 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-208ENST00000527025 LAMTOR5O43504 91 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms