RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TRPC3Q13507 836 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 NR1I3Q14994 352 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 CCDC142Q17RM4 750 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 DSTYKQ6XUX3 929 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 SLC36A4Q6YBV0 504 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 USP37Q86T82 979 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TMEM150AQ86TG1 271 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 ARHGEF19Q8IW93 802 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TOP6BLQ8N6T0 577 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 FRMD1Q8N878 549 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
NEDD8-204ENST00000526430 ATAD1Q8NBU5 361 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 OSCP1Q8WVF1 389 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TAF4BQ92750 862 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 KREMEN1Q96MU8 473 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 ARID3AQ99856 593 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 SMYD3Q9H7B4 428 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 ATP2C2O75185 946 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 SOAT2O75908 522 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 NOL4O94818 638 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 ATF6P18850 670 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 ACO1P21399 889 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 WARSP23381 471 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 PIK3CAP42336 1068 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 KLK7P49862 253 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 NOP14P78316 857 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 MYL7Q01449 175 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF33AQ06730 810 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 LRMPQ12912 555 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 MYO1EQ12965 1108 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 NR1H3Q13133 447 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 MTF1Q14872 753 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 EML3Q32P44 896 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 MAB21L3Q8N8X9 362 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 BAHD1Q8TBE0 780 aaPredicted RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 FCRL3Q96P31 734 aaPredicted RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 ZDHHC5Q9C0B5 715 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 INTS2Q9H0H0 1204 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 DUS2Q9NX74 493 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 TOR4AQ9NXH8 423 aa11.55□□□□□ -0.56
NEDD8-204ENST00000526430 NXF1Q9UBU9 619 aaKnown RBP11.55□□□□□ -0.56
NEDD8-204ENST00000526430 A0A1B0GTH6 734 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 RNF225M0QZC1 329 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 EPHB6O15197 1021 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 F11P03951 625 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF883P0CG24 379 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ITPKBP27987 946 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 PBX1P40424 430 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 OPRD1P41143 372 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 SEC13P55735 322 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 RPL6Q02878 288 aaKnown RBP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 SRSF1Q07955 248 aaKnown RBP eCLIP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 USP4Q13107 963 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF77Q15935 545 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF699Q32M78 642 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ZNF667Q5HYK9 610 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 FAM171BQ6P995 826 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 MON1AQ86VX9 555 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 TTC30AQ86WT1 665 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 CCDC33Q8N5R6 958 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 NAA15Q9BXJ9 866 aaKnown RBP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 ZCWPW1Q9H0M4 648 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 BCCIPQ9P287 314 aaKnown RBP eCLIP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 MAGEC2Q9UBF1 373 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-204ENST00000526430 SUSD2Q9UGT4 822 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 HMGXB4Q9UGU5 601 aa11.54□□□□□ -0.56
NEDD8-204ENST00000526430 BECN2A8MW95 431 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ODC1P11926 461 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
NEDD8-204ENST00000526430 EIF2S3P41091 472 aaKnown RBP11.53□□□□□ -0.56
NEDD8-204ENST00000526430 IFNAR2P48551 515 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 CDR1P51861 262 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 FANCCQ00597 558 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 KCNC4Q03721 635 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 INCA1Q0VD86 236 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 EOGTQ5NDL2 527 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 OVOS1Q6IE37 1185 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 PCSK4Q6UW60 755 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 RRAGAQ7L523 313 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 ADGRF2Q8IZF7 708 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
NEDD8-204ENST00000526430 TMEM86AQ8N2M4 240 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms