RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SACM1LQ9NTJ5 587 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 STEAP1Q9UHE8 339 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 PCDHA7Q9UN72 937 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 SBNO2Q9Y2G9 1366 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 SPATA31A1Q5TZJ5 1347 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 PYCARD-AS1I3L0S3 204 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 TNFRSF13BO14836 293 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 PRPF4O43172 522 aaKnown RBP eCLIP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 CCP110O43303 1012 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 AKAP10O43572 662 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 SNX2O60749 519 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 PLGP00747 810 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 ST6GAL1P15907 406 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 YY1P25490 414 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC7A1P30825 629 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 KCNJ4P48050 445 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 RRP1P56182 461 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 RPL36AP83881 106 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 ARHGEF7Q14155 803 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 ST3GAL2Q16842 350 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 USP49Q70CQ1 688 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 RBM23Q86U06 439 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 DENND1CQ8IV53 801 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 PPP1R35Q8TAP8 253 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 MAML1Q92585 1016 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 NUP88Q99567 741 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 CINPQ9BW66 212 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 SF3B5Q9BWJ5 86 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 FZD3Q9NPG1 666 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 SEMA5BQ9P283 1151 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 GABBR1Q9UBS5 961 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 HDAC9Q9UKV0 1011 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 RIMKLBQ9ULI2 386 aa3.29□□□□□ -1.88
ECHDC1-219ENST00000526299 USP19O94966 1318 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 RAB27BO00194 218 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 LINC01565O15544 149 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 PAPSS2O95340 614 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 TMIGD3P0DMS9 266 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 EN2P19622 333 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 VPS41P49754 854 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 ENTPD1P49961 510 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 AGFG1P52594 562 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 SUMO3P55854 103 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 EIF4A1P60842 406 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 WDR5P61964 334 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC29A2Q14542 456 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 RBM44Q6ZP01 1051 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 TRAPPC11Q7Z392 1133 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 MICU3Q86XE3 530 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 P3H2Q8IVL5 708 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 UEVLDQ8IX04 471 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 IL31RAQ8NI17 732 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 CHMP4CQ96CF2 233 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC12A5Q9H2X9 1139 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 TCF7L1Q9HCS4 588 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 PAPOLBQ9NRJ5 636 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 AASDHPPTQ9NRN7 309 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 PLSCR4Q9NRQ2 329 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 VPS45Q9NRW7 570 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 VPS4AQ9UN37 437 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC27A6Q9Y2P4 619 aa3.28□□□□□ -1.88
ECHDC1-219ENST00000526299 A0A0G2JK05 382 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 SERINC4A6NH21 518 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 H0YGN5 161 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 H3BML4 177 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 TBX3O15119 743 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 SPTLC2O15270 562 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 MARCH6O60337 910 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 ATG13O75143 517 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 ZNF432O94892 652 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 CT47B1P0C2W7 299 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 TMEM225BP0DP42 221 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 ZKSCAN1P17029 563 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 TPH1P17752 444 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 IDUAP35475 653 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 CNGA3Q16281 694 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 LMO3Q8TAP4 145 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 SMCR8Q8TEV9 937 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 LRGUKQ96M69 825 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 SAP30LQ9HAJ7 183 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 ATP6V0A4Q9HBG4 840 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 THSD1Q9NS62 852 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 CPNE7Q9UBL6 633 aa3.27□□□□□ -1.89
ECHDC1-219ENST00000526299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 MBD3L4A6NDZ8 208 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 MBD3L3A6NE82 208 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 MBPP02686 304 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 ACAA1P09110 424 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 MYBP10242 640 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 RHCEP18577 417 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 TFEBP19484 476 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 KLRC1P26715 233 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 CPT1AP50416 773 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 DNASE1L3Q13609 305 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 SMTNL2Q2TAL5 461 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 OTUD3Q5T2D3 398 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 NADSYN1Q6IA69 706 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 GRHL2Q6ISB3 625 aa3.26□□□□□ -1.89
ECHDC1-219ENST00000526299 B3GNT9Q6UX72 402 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms