RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 HMGCRP04035 888 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 ERBB2P04626 1255 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 CAPNS1P04632 268 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 FGF3P11487 239 aaPredicted RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 MLNP12872 115 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 VAV1P15498 845 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 ATP5OP48047 213 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 HARS2P49590 506 aaKnown RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 UBAP2LQ14157 1087 aaKnown RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 ZNF699Q32M78 642 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 FASTKD1Q53R41 847 aaKnown RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 RFX8Q6ZV50 586 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 LCA5Q86VQ0 697 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 FBXW8Q8N3Y1 598 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 GDPD5Q8WTR4 605 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
BDNF-213ENST00000525950 ZNF778Q96MU6 729 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 EBF4Q9BQW3 602 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 CALN1Q9BXU9 219 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 MTMR12Q9C0I1 747 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 ZNF302Q9NR11 478 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 HOMER2Q9NSB8 354 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.09
BDNF-213ENST00000525950 PARP14Q460N5 1801 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 MSCO60682 206 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 AVILO75366 819 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 HOXC6P09630 235 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 GPD1P21695 349 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 SLC1A6P48664 564 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 NUMBP49757 651 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 MTTPP55157 894 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 CDH6P55285 790 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PDK3Q15120 406 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 USP41Q3LFD5 358 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 TBC1D25Q3MII6 688 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 TMEM259Q4ZIN3 620 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 SH2D4BQ5SQS7 431 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 HSPH1Q92598 858 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ITFG2Q969R8 447 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PEBP4Q96S96 227 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ACO2Q99798 780 aaKnown RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 VRTNQ9H8Y1 702 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 RNF146Q9NTX7 359 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 VPS28Q9UK41 221 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 RAB26Q9ULW5 256 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 POMPQ9Y244 141 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 SF3B1O75533 1304 aaKnown RBP eCLIP8.26□□□□□ -1.09
BDNF-213ENST00000525950 C2CD4BA6NLJ0 364 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZNF195O14628 629 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 USP1O94782 785 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 IL4RP24394 825 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 RPL5P46777 297 aaKnown RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 CAPSQ13938 189 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 R3HDM1Q15032 1099 aaKnown RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 SCARA3Q6AZY7 606 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 NPNTQ6UXI9 565 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZNF534Q76KX8 674 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 CDKL3Q8IVW4 592 aaPredicted RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 CATSPER1Q8NEC5 780 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 AFG1LQ8WV93 481 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 KCNK16Q96T55 309 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 RTKNQ9BST9 563 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 TMEM39BQ9GZU3 492 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PDZD7Q9H5P4 517 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 CYP3A43Q9HB55 503 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PCSK1NQ9UHG2 260 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PADI4Q9UM07 663 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 DNAJC16Q9Y2G8 782 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 GMEB1Q9Y692 573 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 H3BNX3 289 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 APOL1O14791 398 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 KCNN4O15554 427 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PLIN3O60664 434 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 MMP10P09238 476 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 PROZP22891 400 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 GRIA2P42262 883 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 IDH3AP50213 366 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 TAF5Q15542 800 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZNF394Q53GI3 561 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 FSCBQ5H9T9 825 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 CFAP157Q5JU67 520 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 FAXCQ5TGI0 409 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 BORAQ6PGQ7 559 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ICA1LQ8NDH6 482 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ATP2A3Q93084 1043 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ANKRD36BP1Q96IX9 119 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZFRQ96KR1 1074 aaKnown RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 PRICKLE1Q96MT3 831 aaPredicted RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 ZNF670Q9BS34 389 aa8.26□□□□□ -1.09
BDNF-213ENST00000525950 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
BDNF-213ENST00000525950 Q9H521 79 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms