RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 PPEF2O14830 753 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 RASA4O43374 803 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 COQ9O75208 318 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 EGR1P18146 543 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 DRD1P21728 446 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 GAB1Q13480 694 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 KPNB1Q14974 876 aaKnown RBP4.71□□□□□ -1.66
CD44-217ENST00000525348 RABEP1Q15276 862 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 SLC5A9Q2M3M2 681 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 CC2D1BQ5T0F9 858 aaKnown RBP4.71□□□□□ -1.66
CD44-217ENST00000525348 TFAP2DQ7Z6R9 452 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 FAM71DQ8N9W8 422 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 NGDNQ8NEJ9 315 aaKnown RBP4.71□□□□□ -1.66
CD44-217ENST00000525348 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
CD44-217ENST00000525348 COQ8BQ96D53 544 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 SNX27Q96L92 541 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 ABHD10Q9NUJ1 306 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 TUBA8Q9NY65 449 aaPredicted RBP4.71□□□□□ -1.66
CD44-217ENST00000525348 ELOVL5Q9NYP7 299 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 RGL1Q9NZL6 768 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 VPS4AQ9UN37 437 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 ZNF521Q96K83 1311 aa4.71□□□□□ -1.66
CD44-217ENST00000525348 M0QZQ0 153 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 DHHO43323 396 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 CCNT2O60583 730 aaKnown RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 FGF18O76093 207 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 MMP13P45452 471 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 JAK3P52333 1124 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 WDR5P61964 334 aaKnown RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 GHRHRQ02643 423 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 ATP1A4Q13733 1029 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 TRIP6Q15654 476 aaKnown RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 ARL13BQ3SXY8 428 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 TMEM63BQ5T3F8 832 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 IL31Q6EBC2 164 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 TXLNBQ8N3L3 684 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 ABHD5Q8WTS1 349 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 SIGLEC11Q96RL6 698 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 CINPQ9BW66 212 aaPredicted RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 GATA5Q9BWX5 397 aaPredicted RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 TM2D2Q9BX73 214 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 ADGRE3Q9BY15 652 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 ARNT2Q9HBZ2 717 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 AGO4Q9HCK5 861 aaKnown RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 TMEM184CQ9NVA4 438 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 TRNAU1APQ9NX07 287 aaKnown RBP4.7□□□□□ -1.66
CD44-217ENST00000525348 MTMR4Q9NYA4 1195 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 TMOD4Q9NZQ9 345 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 PHTF1Q9UMS5 762 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 SPATA31A1Q5TZJ5 1347 aa4.7□□□□□ -1.66
CD44-217ENST00000525348 RNF8O76064 485 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 CYP19A1P11511 503 aaPredicted RBP4.69□□□□□ -1.66
CD44-217ENST00000525348 ALADP13716 330 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 NEK3P51956 506 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 DGKQP52824 942 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 HLTFQ14527 1009 aaKnown RBP eCLIP4.69□□□□□ -1.66
CD44-217ENST00000525348 PIK3AP1Q6ZUJ8 805 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 PIP4P1Q86T03 277 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 DPP9Q86TI2 863 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 CLASRPQ8N2M8 674 aaKnown RBP4.69□□□□□ -1.66
CD44-217ENST00000525348 OR2C3Q8N628 320 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 CCDC150Q8NCX0 1101 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 PRSS3P2Q8NHM4 247 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 BRI3BPQ8WY22 251 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 KIAA1191Q96A73 305 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 C18orf8Q96DM3 657 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 NUAK2Q9H093 628 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 FSCN3Q9NQT6 498 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 GEMIN8Q9NWZ8 242 aaKnown RBP4.69□□□□□ -1.66
CD44-217ENST00000525348 AFG3L2Q9Y4W6 797 aa4.69□□□□□ -1.66
CD44-217ENST00000525348 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 PRYO14603 147 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 ZSCAN9O15535 394 aaPredicted RBP4.68□□□□□ -1.66
CD44-217ENST00000525348 PTGER1P34995 402 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 IDUAP35475 653 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 NR4A2P43354 598 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 TBX4P57082 545 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 ZNF91Q05481 1191 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 BFSP2Q13515 415 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 MPEG1Q2M385 716 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 NRACQ8N912 160 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 C16orf52Q8NHV5 167 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 PKNOX2Q96KN3 472 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 FCRL4Q96PJ5 515 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 CHMP4AQ9BY43 222 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.68□□□□□ -1.66
CD44-217ENST00000525348 PCDHGB2Q9Y5G2 931 aa4.68□□□□□ -1.66
CD44-217ENST00000525348 PRC1O43663 620 aa4.67□□□□□ -1.66
CD44-217ENST00000525348 CAND2O75155 1236 aa4.67□□□□□ -1.66
CD44-217ENST00000525348 PRF1P14222 555 aa4.67□□□□□ -1.66
CD44-217ENST00000525348 EEF1GP26641 437 aaKnown RBP4.67□□□□□ -1.66
CD44-217ENST00000525348 NDUFS1P28331 727 aa4.67□□□□□ -1.66
CD44-217ENST00000525348 TACR3P29371 465 aa4.67□□□□□ -1.66
CD44-217ENST00000525348 IGHMBP2P38935 993 aaKnown RBP4.67□□□□□ -1.66
CD44-217ENST00000525348 HSPA7P48741 367 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms