RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 DNAAF2Q9NVR5 837 aaKnown RBP25.21■■□□□ 1.63
USP47-205ENST00000525257 FRMD4BQ9Y2L6 1034 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 H0Y626 953 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 IKBKBO14920 756 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 STC2O76061 302 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 KIF20AO95235 890 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 TRIM16O95361 564 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 F13A1P00488 732 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 ZSCAN22P10073 491 aaPredicted RBP25.2■■□□□ 1.62
USP47-205ENST00000525257 CD58P19256 250 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 MAOBP27338 520 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 SYCP2LQ5T4T6 812 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 SCD5Q86SK9 330 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 IMPG2Q9BZV3 1241 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 FAM124BQ9H5Z6 455 aaPredicted RBP25.2■■□□□ 1.62
USP47-205ENST00000525257 APOBEC3GQ9HC16 384 aaKnown RBP25.2■■□□□ 1.62
USP47-205ENST00000525257 PNPLA8Q9NP80 782 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 SUSD2Q9UGT4 822 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 STON1Q9Y6Q2 735 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 BAHCC1Q9P281 2608 aa25.2■■□□□ 1.62
USP47-205ENST00000525257 SH3BP5O60239 455 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 KIF11P52732 1056 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 STARD3Q14849 445 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 FUT11Q495W5 492 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 FOXJ1Q92949 421 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 RASAL2Q9UJF2 1139 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 FBXO10Q9UK96 956 aa25.19■■□□□ 1.62
USP47-205ENST00000525257 ANKRD11Q6UB99 2663 aaPredicted RBP25.19■■□□□ 1.62
USP47-205ENST00000525257 FREM2Q5SZK8 3169 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 KLKB1P03952 638 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 TRIM49P0CI25 452 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 TRIM49CP0CI26 452 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 PDIA4P13667 645 aaKnown RBP25.18■■□□□ 1.62
USP47-205ENST00000525257 HOXB3P14651 431 aaPredicted RBP25.18■■□□□ 1.62
USP47-205ENST00000525257 GNSP15586 552 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 CD6P30203 668 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 GCLMP48507 274 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 VAMP7P51809 220 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 ZNF423Q2M1K9 1284 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 WDR45BQ5MNZ6 344 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 CCDC186Q7Z3E2 898 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 TADA2BQ86TJ2 420 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 SPRYD3Q8NCJ5 442 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 TAS1R2Q8TE23 839 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 PRDM16Q9HAZ2 1276 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 CYP3A43Q9HB55 503 aa25.18■■□□□ 1.62
USP47-205ENST00000525257 MEI4A8MW99 385 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 CALUO43852 315 aaPredicted RBP25.17■■□□□ 1.62
USP47-205ENST00000525257 CILPO75339 1184 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 GJB3O75712 270 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 HMBSP08397 361 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 RALAP11233 206 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 PSEN1P49768 467 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 MFAP3P55082 362 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 GRIK2Q13002 908 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 HNRNPDQ14103 355 aaKnown RBP25.17■■□□□ 1.62
USP47-205ENST00000525257 GEN1Q17RS7 908 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 FYB2Q5VWT5 728 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 RAB44Q7Z6P3 723 aaPredicted RBP25.17■■□□□ 1.62
USP47-205ENST00000525257 TOE1Q96GM8 510 aaKnown RBP25.17■■□□□ 1.62
USP47-205ENST00000525257 NIF3L1Q9GZT8 377 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 MMRN2Q9H8L6 949 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 SLC27A6Q9Y2P4 619 aa25.17■■□□□ 1.62
USP47-205ENST00000525257 PENKP01210 267 aaPredicted RBP25.16■■□□□ 1.62
USP47-205ENST00000525257 IL12RB1P42701 662 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 EFEMP1Q12805 493 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 SLC14A1Q13336 389 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 ITPR1Q14643 2758 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 TRIP6Q15654 476 aaKnown RBP25.16■■□□□ 1.62
USP47-205ENST00000525257 PPP1R26Q5T8A7 1209 aaPredicted RBP25.16■■□□□ 1.62
USP47-205ENST00000525257 NAXDQ8IW45 347 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 NBEAQ8NFP9 2946 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 GPR174Q9BXC1 333 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 DUSP16Q9BY84 665 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 MKRN2Q9H000 416 aaKnown RBP25.16■■□□□ 1.62
USP47-205ENST00000525257 ZNF510Q9Y2H8 683 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 PCDHB9Q9Y5E1 797 aa25.16■■□□□ 1.62
USP47-205ENST00000525257 NCAM1P13591 858 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 CORO1AP31146 461 aaKnown RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 DNM1Q05193 864 aaKnown RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 RING1Q06587 406 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 PPP3CAQ08209 521 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 ZNF394Q53GI3 561 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 ZCCHC9Q8N567 271 aaKnown RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 CDK5RAP1Q96SZ6 601 aaKnown RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 WSB2Q9NYS7 404 aaPredicted RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 CLIC5Q9NZA1 410 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 USP36Q9P275 1121 aaKnown RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 THAP10Q9P2Z0 257 aaPredicted RBP25.15■■□□□ 1.62
USP47-205ENST00000525257 CFAP45Q9UL16 551 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 USP3Q9Y6I4 520 aa25.15■■□□□ 1.62
USP47-205ENST00000525257 A0A1B0GVL5 298 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 FAM221BA6H8Z2 402 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 KCNJ18B7U540 433 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 PFKFB1P16118 471 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 NR2F2P24468 414 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 CHKAP35790 457 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 COG7P83436 770 aa25.14■■□□□ 1.62
USP47-205ENST00000525257 COL9A2Q14055 689 aaPredicted RBP25.14■■□□□ 1.62
USP47-205ENST00000525257 ATL3Q6DD88 541 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms