RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TRPC7Q9HCX4 862 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 CNGB3Q9NQW8 809 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 ASAH2Q9NR71 780 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 SMPD4Q9NXE4 827 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 MRPS23Q9Y3D9 190 aaKnown RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 HYOU1Q9Y4L1 999 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 ASB3Q9Y575 518 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 EPN1Q9Y6I3 576 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 TCF20Q9UGU0 1960 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 GOLGA6L7A0A1B0GV03 622 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ANTXRLA6NF34 631 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 C2CD4BA6NLJ0 364 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 USP27XA6NNY8 438 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 EIF3CLB5ME19 914 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 NCK2O43639 380 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 AKR1B10O60218 316 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 TLR5O60602 858 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 OLFM2O95897 454 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 IGLV3-25P01717 112 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CYP1A2P05177 515 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ASGR2P07307 311 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 TPM1P09493 284 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 IRF1P10914 325 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 GZMAP12544 262 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 BMP1P13497 986 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 GGCXP38435 758 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ARHGAP25P42331 645 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ACADSBP45954 432 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 NSFP46459 744 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 ITIH3Q06033 890 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ZNF268Q14587 947 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 SMAD2Q15796 467 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 PTPRNQ16849 979 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ATAT1Q5SQI0 421 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 FAM102AQ5T9C2 384 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 NAIF1Q69YI7 327 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 CYP26C1Q6V0L0 522 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 RTL10Q7L3V2 364 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 BNIPLQ7Z465 357 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ITIH5Q86UX2 942 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 MON1AQ86VX9 555 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ARID3BQ8IVW6 561 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 SIX6OS1Q8N1H7 587 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 RXFP2Q8WXD0 754 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 GLMNQ92990 594 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 USP13Q92995 863 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 FAM149B1Q96BN6 582 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 RPGRIP1Q96KN7 1286 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CALR3Q96L12 384 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 CCDC42Q96M95 316 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 MCEEQ96PE7 176 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 PEBP4Q96S96 227 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 NPY6RQ99463 290 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 EIF3CQ99613 913 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 KXD1Q9BQD3 176 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 DDX23Q9BUQ8 820 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 LINC00597Q9H2U6 94 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CYLDQ9NQC7 956 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 PRDM9Q9NQV7 894 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 COMMD8Q9NX08 183 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 TRPM5Q9NZQ8 1165 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CNOT8Q9UFF9 292 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 RASAL2Q9UJF2 1139 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CDH7Q9ULB5 785 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 PAXBP1Q9Y5B6 917 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 PCDHA13Q9Y5I0 950 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 CPQQ9Y646 472 aa6.78□□□□□ -1.32
CD44-214ENST00000525211 BZW2Q9Y6E2 419 aaKnown RBP6.78□□□□□ -1.32
CD44-214ENST00000525211 SYNJ2BP-COX16A0A087WUM0 186 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TMEM191CA6NGB0 347 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 TRDMT1O14717 391 aaKnown RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 CCP110O43303 1012 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 NARSO43776 548 aaKnown RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 DAB1O75553 588 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 STC2O76061 302 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 DXOO77932 396 aaKnown RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 FBXO21O94952 628 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 H2AFZP0C0S5 128 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 CCDC172P0C7W6 258 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 LAMP2P13473 410 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 NCAM1P13591 858 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ARSAP15289 507 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 HDCP19113 662 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 GBP2P32456 591 aaPredicted RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 MTHFRP42898 656 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 MAGEA1P43355 309 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 IRAK1P51617 712 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 SGSHP51688 502 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 HDAC4P56524 1084 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 GSCP56915 257 aaPredicted RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 GSDMDP57764 484 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ATP11AP98196 1134 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms