RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 GCNT1Q02742 428 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 KDSRQ06136 332 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 ANO4Q32M45 955 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 HSP90AA4PQ58FG1 418 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 MIIPQ5JXC2 388 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 GBP6Q6ZN66 633 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 LOXL4Q96JB6 756 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 FAM81BQ96LP2 452 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 MARK1Q9P0L2 795 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 TSPAN16Q9UKR8 245 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 PRR5-ARHGAP8B1AHC4 643 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 O00370 1275 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 EPN2O95208 641 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 VDRP11473 427 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ZNF18P17022 549 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 PSEN1P49768 467 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 TKTL1P51854 596 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 DGKEP52429 567 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 FOXK2Q01167 660 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 SF3A2Q15428 464 aaKnown RBP13.15□□□□□ -0.3
SMCO4-202ENST00000525141 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 GOLGA7BQ2TAP0 167 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 PRR23CQ6ZRP0 262 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 TPGS1Q6ZTW0 290 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ARHGEF19Q8IW93 802 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ANKRD20A12PQ8NF67 263 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 SLC35F5Q8WV83 523 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ACDQ96AP0 544 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ACOX2Q99424 681 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 ULBP1Q9BZM6 244 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 NACA2Q9H009 215 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 INTS2Q9H0H0 1204 aaKnown RBP13.15□□□□□ -0.3
SMCO4-202ENST00000525141 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 CD248Q9HCU0 757 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
SMCO4-202ENST00000525141 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
SMCO4-202ENST00000525141 DCDC2BA2VCK2 349 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 TM4SF5O14894 197 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
SMCO4-202ENST00000525141 ZBED1O96006 694 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 TPM2P07951 284 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 TYRP14679 529 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 SLC9A1P19634 815 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
SMCO4-202ENST00000525141 BCKDHBP21953 392 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 PON1P27169 355 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMCO4-202ENST00000525141 LMNB2Q03252 620 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 IQCB1Q15051 598 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 KRT31Q15323 416 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 CNGA2Q16280 664 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 PMF1Q6P1K2 205 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 TRIM65Q6PJ69 517 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 LCLAT1Q6UWP7 414 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 RRAGAQ7L523 313 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
SMCO4-202ENST00000525141 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 RLN3Q8WXF3 142 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 KCTD13Q8WZ19 329 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 WDR35Q9P2L0 1181 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
SMCO4-202ENST00000525141 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
SMCO4-202ENST00000525141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-202ENST00000525141 A0A1W2PQF6 199 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 BECN2A8MW95 431 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-202ENST00000525141 E7ENQ6 273 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 NEDD8-MDP1E9PL57 170 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 CACNG3O60359 315 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 HMBSP08397 361 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 RALAP11233 206 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 CD19P15391 556 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 WASP42768 502 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms