RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ABCB4P21439 1286 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TNFAIP3P21580 790 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DRD1P21728 446 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CD72P21854 359 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TARSP26639 723 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CDH5P33151 784 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 GJA4P35212 333 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SCNN1AP37088 669 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 EIF2DP41214 584 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 RPS9P46781 194 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 RPL34P49207 117 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PGFP49763 221 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PTPN5P54829 565 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 RNASE9P60153 205 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NOMO3P69849 1222 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZBED6P86452 979 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC6A3Q01959 620 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 RING1Q06587 406 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 KLHL30Q0D2K2 578 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PON2Q15165 354 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DHCR24Q15392 516 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 FBXO43Q4G163 708 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PTPN20Q4JDL3 420 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 LY6G5CQ5SRR4 150 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SPECC1LQ69YQ0 1117 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DPY19L2P1Q6NXN4 242 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TPGS1Q6ZTW0 290 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM183BPQ6ZVS7 135 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC26A9Q7LBE3 791 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 BHLHA9Q7RTU4 235 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DENND1CQ8IV53 801 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCDC105Q8IYK2 499 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SYNPOQ8N3V7 929 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMEM105Q8N8V8 129 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATP6V0D2Q8N8Y2 350 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF557Q8N988 423 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DTWD2Q8NBA8 298 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 RIN3Q8TB24 985 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DQX1Q8TE96 717 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CLEC4CQ8WTT0 213 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC20A1Q8WUM9 679 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CPA5Q8WXQ8 436 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DDX1Q92499 740 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRIM11Q96F44 468 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PNKPQ96T60 521 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 AGPAT1Q99943 283 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DDX23Q9BUQ8 820 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 BBS2Q9BXC9 721 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRIM5Q9C035 493 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 XPO4Q9C0E2 1151 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SPHK2Q9NRA0 654 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DNAJC17Q9NVM6 304 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SPATA6Q9NWH7 488 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DDIT4Q9NX09 232 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DEC1Q9P2X7 70 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TJP2Q9UDY2 1190 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 SFMBT1Q9UHJ3 866 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CYTH4Q9UIA0 394 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NOCTQ9UK39 431 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NAALADL1Q9UQQ1 740 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TLR6Q9Y2C9 796 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 LUC7L2Q9Y383 392 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PTPRDP23468 1912 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 UNC80Q8N2C7 3258 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ITIH6Q6UXX5 1313 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 TTC28Q96AY4 2481 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NOTCH4Q99466 2003 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 REV3LO60673 3130 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SYNJ2BP-COX16A0A087WUM0 186 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 GOLGA6L6A8MZA4 724 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 M0QYT0 321 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRDMT1O14717 391 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZBTB24O43167 697 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 IRAK2O43187 625 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 GALR2O43603 387 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 GRAP2O75791 330 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRUB2O95900 331 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MOCS2O96007 188 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 F9P00740 461 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SERPING1P05155 500 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 COL9A1P20849 921 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MMP8P22894 467 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCR1P32246 355 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 NOS2P35228 1153 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MATKP42679 507 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 GABRB2P47870 512 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SULT1E1P49888 294 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCR3P51677 355 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZXDBP98169 803 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 FMO1Q01740 532 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CENPCQ03188 943 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 KDSRQ06136 332 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 NME3Q13232 169 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CLEC16AQ2KHT3 1053 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MPPE1Q53F39 396 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMEM196Q5HYL7 178 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms