RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 MSI1O43347 362 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 LTFP02788 710 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 HOXA6P31267 233 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 C10orf76Q5T2E6 689 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 GRAMD4Q6IC98 578 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 DPY19L2P1Q6NXN4 242 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 TOGARAM2Q6ZUX3 1019 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 PASD1Q8IV76 773 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 SCML4Q8N228 414 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 TXNDC5Q8NBS9 432 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 IRGQQ8WZA9 623 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 SHC3Q92529 594 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 RUBCNQ92622 972 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 ACDQ96AP0 544 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 XPO6Q96QU8 1125 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 WDR35Q9P2L0 1181 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 ZNF510Q9Y2H8 683 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 SGK1O00141 431 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 CACNG3O60359 315 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 TSPAN3O60637 253 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 FBXO21O94952 628 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 MBD3O95983 291 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 HNRNPLP14866 589 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 EEF1GP26641 437 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 WASP42768 502 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 TNFRSF4P43489 277 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 KIR2DL1P43626 348 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 MRPS21P82921 87 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 RAPGEF1Q13905 1077 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 TRIP4Q15650 581 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 CEP68Q76N32 757 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 KIAA2013Q8IYS2 634 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 TERB1Q8NA31 727 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 IL17RCQ8NAC3 791 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 CCDC26Q8TAB7 109 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 PLD4Q96BZ4 506 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 SLC4A5Q9BY07 1137 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 ANO10Q9NW15 660 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 TJP2Q9UDY2 1190 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 RAB23Q9ULC3 237 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 MMP17Q9ULZ9 603 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 INVSQ9Y283 1065 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 FHOD1Q9Y613 1164 aa13.42□□□□□ -0.26
TRAPPC4-205ENST00000525079 FAM170AA1A519 330 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 E5RJQ4 531 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 AXIN1O15169 862 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 APBB3O95704 486 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 FYNP06241 537 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CISD3P0C7P0 127 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 NCAM1P13591 858 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CNR2P34972 360 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CLCN1P35523 988 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CHKAP35790 457 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 ACADSBP45954 432 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 HARS2P49590 506 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 DGKGP49619 791 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 DGKEP52429 567 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 PTK2Q05397 1052 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 DRAP1Q14919 205 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 KRT31Q15323 416 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 STX1AQ16623 288 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 KLHDC7AQ5VTJ3 777 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CDKAL1Q5VV42 579 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 FYB2Q5VWT5 728 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 SLC47A2Q86VL8 602 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 WDTC1Q8N5D0 677 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 ERLEC1Q96DZ1 483 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 PLCB1Q9NQ66 1216 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 HCN2Q9UL51 889 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 CLEC4EQ9ULY5 219 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 HBS1LQ9Y450 684 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 USP34Q70CQ2 3546 aa13.41□□□□□ -0.26
TRAPPC4-205ENST00000525079 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 VPS13AQ96RL7 3174 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 PRRT4C9JH25 899 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 DCLK1O15075 740 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 ADAM23O75077 832 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 KLK7P49862 253 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 PDCLQ13371 301 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 TAF5Q15542 800 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 CRY1Q16526 586 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 PREPLQ4J6C6 727 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms