RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 COQ10AQ96MF6 247 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 DKK3Q9UBP4 350 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 ZNF69Q9UC07 566 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 TESQ9UGI8 421 aaKnown RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 MYO15BQ96JP2 1530 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 E7EVH7 732 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 M0QYT0 321 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 CBFA2T3O75081 653 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 PRKCBP05771 671 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 CHRM2P08172 466 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 ALADP13716 330 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 COL15A1P39059 1388 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 ACTR2P61160 394 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 SF3A3Q12874 501 aaKnown RBP eCLIP6.63□□□□□ -1.35
SKP1-213ENST00000524288 TBX2Q13207 712 aaPredicted RBP6.63□□□□□ -1.35
SKP1-213ENST00000524288 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 PIK3AP1Q6ZUJ8 805 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 P3H2Q8IVL5 708 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 SLC22A17Q8WUG5 538 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 ASB10Q8WXI3 467 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 PPM1MQ96MI6 270 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 SEC62Q99442 399 aaKnown RBP6.63□□□□□ -1.35
SKP1-213ENST00000524288 EIF3CQ99613 913 aaKnown RBP6.63□□□□□ -1.35
SKP1-213ENST00000524288 DPCDQ9BVM2 203 aaPredicted RBP6.63□□□□□ -1.35
SKP1-213ENST00000524288 ZCWPW1Q9H0M4 648 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 SMC4Q9NTJ3 1288 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 STEAP1Q9UHE8 339 aa6.63□□□□□ -1.35
SKP1-213ENST00000524288 C19orf53Q9UNZ5 99 aaPredicted RBP6.63□□□□□ -1.35
SKP1-213ENST00000524288 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 TK1P04183 234 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 TMEM225BP0DP42 221 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 ITGAMP11215 1152 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 FBLP22087 321 aaKnown RBP6.62□□□□□ -1.35
SKP1-213ENST00000524288 TGM1P22735 817 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 SERPINA4P29622 427 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 LIFRP42702 1097 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 GSTM5P46439 218 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
SKP1-213ENST00000524288 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 MTAPQ13126 283 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 DDX10Q13206 875 aaKnown RBP6.62□□□□□ -1.35
SKP1-213ENST00000524288 ACOX1Q15067 660 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 GRHL2Q6ISB3 625 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 DPY19L2P1Q6NXN4 242 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 KRT27Q7Z3Y8 459 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 PRIMA1Q86XR5 153 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 LCORLQ8N3X6 602 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 BEND2Q8NDZ0 799 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 PPHLN1Q8NEY8 458 aaKnown RBP6.62□□□□□ -1.35
SKP1-213ENST00000524288 HERVK_113Q902F9 699 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 FKBP10Q96AY3 582 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 WDYHV1Q96HA8 205 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 SLC26A6Q9BXS9 759 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 CCDC134Q9H6E4 229 aa6.62□□□□□ -1.35
SKP1-213ENST00000524288 ADGRA2Q96PE1 1338 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 A6NLC8 198 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 CA12O43570 354 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 NUDT3O95989 172 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 CYP21A2P08686 494 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 ATP1A3P13637 1013 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 INTS11Q5TA45 600 aaKnown RBP6.61□□□□□ -1.35
SKP1-213ENST00000524288 ANKRD40Q6AI12 368 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 TRABD2AQ86V40 505 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 GPR150Q8NGU9 434 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 SOCS4Q8WXH5 440 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 CPT1BQ92523 772 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 SKA1Q96BD8 255 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 NUDT22Q9BRQ3 303 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 WDR11Q9BZH6 1224 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 ZHX3Q9H4I2 956 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 TBCCD1Q9NVR7 557 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 SYBUQ9NX95 663 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 MAP3K20Q9NYL2 800 aaKnown RBP6.61□□□□□ -1.35
SKP1-213ENST00000524288 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
SKP1-213ENST00000524288 ASAP1Q9ULH1 1129 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 PCDHB2Q9Y5E7 798 aa6.61□□□□□ -1.35
SKP1-213ENST00000524288 STX16-NPEPL1H3BU86 382 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 M0QZQ0 153 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 PSMD9O00233 223 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 STX16O14662 325 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 SLC16A3O15427 465 aaKnown RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 IL6RP08887 468 aaPredicted RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 THBS4P35443 961 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 CCR5P51681 352 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 RBM5P52756 815 aaKnown RBP eCLIP6.6□□□□□ -1.35
SKP1-213ENST00000524288 PDE1AP54750 535 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 ITIH3Q06033 890 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 MAPRE1Q15691 268 aaKnown RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 LRRC24Q50LG9 513 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 ABHD17BQ5VST6 288 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 CCDC144NLQ6NUI1 221 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 RETSATQ6NUM9 610 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 RSRC2Q7L4I2 434 aaKnown RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 DTX2Q86UW9 622 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 TMEM57Q8N5G2 664 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 RSC1A1Q92681 617 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 HTRA1Q92743 480 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 FBXL20Q96IG2 436 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms