RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TMEM150BA6NC51 233 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 RRN3P2A6NIE6 340 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SIGLEC16A6NMB1 481 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ENPP3O14638 875 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 CAPN5O15484 640 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 FAM155BO75949 473 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 VNN1O95497 513 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 CCNE2O96020 404 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 DHRS4L1P0CG22 281 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 INSRRP14616 1297 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 PECAM1P16284 738 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TSHRP16473 764 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ATP6V1C1P21283 382 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SFNP31947 248 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 STAT5BP51692 787 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 KCNQ1P51787 676 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 CCNHP51946 323 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 VCPP55072 806 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 GPX6P59796 221 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ACTR2P61160 394 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SATB1Q01826 763 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 NFX1Q12986 1120 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 DNAJC3Q13217 504 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 MAMLD1Q13495 774 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 FASTKD3Q14CZ7 662 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TAF11Q15544 211 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 P3H1Q32P28 736 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 IER5Q5VY09 327 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ANO7Q6IWH7 933 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM67Q6ZTA4 783 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 FAM47EQ6ZV65 393 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 MAEAQ7L5Y9 396 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 PLPPR4Q7Z2D5 763 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 RCOR2Q8IZ40 523 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 KIRREL3Q8IZU9 778 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 NIPA2Q8N8Q9 360 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 DNAJB3Q8WWF6 145 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 IFT43Q96FT9 208 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 NAF1Q96HR8 494 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 RBM41Q96IZ5 413 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 MIPEPQ99797 713 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TBC1D10AQ9BXI6 508 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 APOBEC3GQ9HC16 384 aaKnown RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SLCO1B3Q9NPD5 702 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 C1orf112Q9NSG2 853 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TBC1D22BQ9NU19 505 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 ARHGAP28Q9P2N2 729 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 PSMC3IPQ9P2W1 217 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 TBK1Q9UHD2 729 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 STK38LQ9Y2H1 464 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 NUMBLQ9Y6R0 609 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SCINQ9Y6U3 715 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 SCN10AQ9Y5Y9 1956 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DENND3A2RUS2 1198 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 EXTL3O43909 919 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DNAJC6O75061 913 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SPAG7O75391 227 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 ZWINTO95229 277 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 NPTXRO95502 500 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 RPLP2P05387 115 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 ITGAVP06756 1048 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 KRT5P13647 590 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PTPN4P29074 926 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 EPHB2P29323 1055 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 NSFP46459 744 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 VPS41P49754 854 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 NEK3P51956 506 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 RAD23BP54727 409 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 KRT76Q01546 638 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DMP1Q13316 513 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LPIN1Q14693 890 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SETDB1Q15047 1291 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LLGL1Q15334 1064 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 TAZQ16635 292 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PKDCCQ504Y2 493 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DAB2IPQ5VWQ8 1189 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 TDRD10Q5VZ19 366 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 CAPRIN2Q6IMN6 1127 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 MFSD7Q6UXD7 560 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SPOCD1Q6ZMY3 1216 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 NLRP9Q7RTR0 991 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 USP37Q86T82 979 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 CHSY1Q86X52 802 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 VSIG1Q86XK7 387 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM192Q8IY95 271 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SLC35B2Q8TB61 432 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 FEZF2Q8TBJ5 459 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LRRC8CQ8TDW0 803 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 CPA5Q8WXQ8 436 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF75CPQ92670 426 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms