RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TKTL2Q9H0I9 626 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 ZNF334Q9HCZ1 680 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 ASAH2Q9NR71 780 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 FBXW11Q9UKB1 542 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PLXNA4Q9HCM2 1894 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC195A0A1B0GUA6 201 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 KRT7P08729 469 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 TERF1P54274 439 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 MMRN1Q13201 1228 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CBX2Q14781 532 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CLUL1Q15846 466 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CA9Q16790 459 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 STXBP5Q5T5C0 1151 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PAPD7Q5XG87 772 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 BHLHA9Q7RTU4 235 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 GRASPQ7Z6J2 395 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 LRRN4CLQ8ND94 238 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 MAK16Q9BXY0 300 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 SMG9Q9H0W8 520 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 AP4E1Q9UPM8 1137 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PCDHA3Q9Y5H8 950 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 DDX3YO15523 660 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 GLI1P08151 1106 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 HMGA1P17096 107 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 RPL34P49207 117 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 FAM182AQ5T1J6 154 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 RWDD4Q6NW29 188 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 PDZD4Q76G19 769 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 IRGQQ8WZA9 623 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 MRPS31Q92665 395 aaKnown RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 GKN1Q9NS71 199 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 IRAK3Q9Y616 596 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 KIAA1671Q9BY89 1806 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 PDE2AO00408 941 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 KRIT1O00522 736 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 GBP1P32455 592 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 GSCP56915 257 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 SNX1Q13596 522 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 EFHC2Q5JST6 749 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 ARHGAP18Q8N392 663 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 ARL14EPQ8N8R7 260 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 NPY6RQ99463 290 aa9.72□□□□□ -0.85
SDCBP-212ENST00000523483 SAE1Q9UBE0 346 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-212ENST00000523483 CTAGE15A4D2H0 777 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 PGRMC1O00264 195 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 PSTPIP1O43586 416 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CTAGE8P0CG41 777 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 HDCP19113 662 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 ATP5C1P36542 298 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 PTPN9P43378 593 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 AMPD2Q01433 879 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 SLC25A11Q02978 314 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 ARL13BQ3SXY8 428 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 RARS2Q5T160 578 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 LILRA6Q6PI73 481 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 B4GALNT4Q76KP1 1039 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CTAGE6Q86UF2 777 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CTAGE4Q8IX94 777 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 SMG7Q92540 1137 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 SLC2A13Q96QE2 648 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TRIM62Q9BVG3 475 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 XPO7Q9UIA9 1087 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 GBF1Q92538 1859 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TCRBV7S2A1N4TA0A589 114 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 ZNF840PA6NDX5 716 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 KCNQ1P51787 676 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TBX4P57082 545 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC85BQ15834 202 aaPredicted RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TCEAL5Q5H9L2 206 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CD101Q93033 1021 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TCEAL4Q96EI5 215 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 LRCH3Q96II8 777 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 CALR3Q96L12 384 aaKnown RBP9.71□□□□□ -0.85
SDCBP-212ENST00000523483 SLC22A12Q96S37 553 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 HEY1Q9Y5J3 304 aa9.71□□□□□ -0.85
SDCBP-212ENST00000523483 TRDMT1O14717 391 aaKnown RBP9.71□□□□□ -0.86
SDCBP-212ENST00000523483 LINC01565O15544 149 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 CCR1P32246 355 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 MAN1A1P33908 653 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 BMP8BP34820 402 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 PEX5P50542 639 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 TCEAL1Q15170 157 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 ERMARDQ5T6L9 678 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 CREG2Q8IUH2 290 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 C1orf54Q8WWF1 131 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms