RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
CLK4-211ENST00000522556 K7EQS6 105 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 HOXC11O43248 304 aaPredicted RBP18.66■□□□□ 0.58
CLK4-211ENST00000522556 TPM2P07951 284 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 MMEP08473 750 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 SEC13P55735 322 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 GOLGA8FQ08AF8 430 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 GOLGA8DPQ0D2H9 430 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 TRIP4Q15650 581 aaPredicted RBP18.66■□□□□ 0.58
CLK4-211ENST00000522556 C2CD6Q53TS8 623 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 FAM183BPQ6ZVS7 135 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 TADA2BQ86TJ2 420 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 TMEM110Q86TL2 294 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 DQX1Q8TE96 717 aaKnown RBP18.66■□□□□ 0.58
CLK4-211ENST00000522556 STK32AQ8WU08 396 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 RNF139Q8WU17 664 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 OTUB2Q96DC9 234 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 ERGIC2Q96RQ1 377 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 CDK5RAP1Q96SZ6 601 aaKnown RBP18.66■□□□□ 0.58
CLK4-211ENST00000522556 NOCTQ9UK39 431 aaKnown RBP18.66■□□□□ 0.58
CLK4-211ENST00000522556 STRIP2Q9ULQ0 834 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 VPS13AQ96RL7 3174 aa18.66■□□□□ 0.58
CLK4-211ENST00000522556 NEDD8-MDP1E9PL57 170 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 K7ESF4 209 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 TULP3O75386 442 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 GRAP2O75791 330 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 FBXO21O94952 628 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 COG7P83436 770 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 GAD2Q05329 585 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 TAC4Q86UU9 113 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 SPEM1Q8N4L4 309 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 ANKRD20A12PQ8NF67 263 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 RPLP0P6Q8NHW5 317 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 PPP1R13BQ96KQ4 1090 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 PCMTD1Q96MG8 357 aaPredicted RBP18.65■□□□□ 0.58
CLK4-211ENST00000522556 NAP1L5Q96NT1 182 aaPredicted RBP18.65■□□□□ 0.58
CLK4-211ENST00000522556 BBS2Q9BXC9 721 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 LHX5Q9H2C1 402 aa18.65■□□□□ 0.58
CLK4-211ENST00000522556 OLA1Q9NTK5 396 aaKnown RBP18.65■□□□□ 0.58
CLK4-211ENST00000522556 EML5Q05BV3 1969 aa18.64■□□□□ 0.58
CLK4-211ENST00000522556 IGLV3-27P01718 113 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 NCAM1P13591 858 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 TYRP14679 529 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 CHRNB2P17787 502 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 DRD1P21728 446 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 KRT9P35527 623 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 SOX5P35711 763 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 NBL1P41271 181 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 ACADSBP45954 432 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 SGSHP51688 502 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 AMPD2Q01433 879 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 OLFML1Q6UWY5 402 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 TOGARAM2Q6ZUX3 1019 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.57
CLK4-211ENST00000522556 FBXO4Q9UKT5 387 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 HCN2Q9UL51 889 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 CLEC4EQ9ULY5 219 aa18.64■□□□□ 0.57
CLK4-211ENST00000522556 SMTNL1A8MU46 457 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 KAT7O95251 611 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 CDH5P33151 784 aaPredicted RBP18.63■□□□□ 0.57
CLK4-211ENST00000522556 CXCL12P48061 93 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 PXNP49023 591 aaPredicted RBP18.63■□□□□ 0.57
CLK4-211ENST00000522556 FYB2Q5VWT5 728 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 NELL1Q92832 810 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 MYEOVQ96EZ4 313 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 FCRL2Q96LA5 508 aaPredicted RBP18.63■□□□□ 0.57
CLK4-211ENST00000522556 PNKPQ96T60 521 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 ADAM33Q9BZ11 813 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 ARHGEF4Q9NR80 690 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 MARK1Q9P0L2 795 aa18.63■□□□□ 0.57
CLK4-211ENST00000522556 XPO7Q9UIA9 1087 aaKnown RBP18.63■□□□□ 0.57
CLK4-211ENST00000522556 HBS1LQ9Y450 684 aaKnown RBP18.63■□□□□ 0.57
CLK4-211ENST00000522556 MYO15AQ9UKN7 3530 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 CACNG3O60359 315 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 TSPAN3O60637 253 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 CCR3P51677 355 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 BPIFB4P59827 614 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 NOMO3P69849 1222 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 FMO1Q01740 532 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 C2orf27AQ580R0 203 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 NAA35Q5VZE5 725 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 HEATR6Q6AI08 1181 aaKnown RBP18.62■□□□□ 0.57
CLK4-211ENST00000522556 NADSYN1Q6IA69 706 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 OR6B2Q6IFH4 312 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 ASCL5Q7RTU5 278 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 ALYREFQ86V81 257 aaKnown RBP18.62■□□□□ 0.57
CLK4-211ENST00000522556 FAM217AQ8IXS0 508 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 SYNPOQ8N3V7 929 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 CCDC33Q8N5R6 958 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 USP33Q8TEY7 942 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 SPAG5Q96R06 1193 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 IER2Q9BTL4 223 aa18.62■□□□□ 0.57
CLK4-211ENST00000522556 DNAJC17Q9NVM6 304 aaKnown RBP18.62■□□□□ 0.57
CLK4-211ENST00000522556 MYO18AQ92614 2054 aaKnown RBP18.61■□□□□ 0.57
CLK4-211ENST00000522556 A0A1B0GTH6 734 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 CHURC1-FNTBB4DL54 471 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms