RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 ZBP1Q9H171 429 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 MTIF3Q9H2K0 278 aaKnown RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 ALG13Q9NP73 1137 aaKnown RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 MTMR10Q9NXD2 777 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 CCDC151A5D8V7 595 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 MSI1O43347 362 aaKnown RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 RTN3O95197 1032 aaPredicted RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 ATF2P15336 505 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 CTNNB1P35222 781 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 PTGIRP43119 386 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 BRD3Q15059 726 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 BBS12Q6ZW61 710 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 SPRED2Q7Z698 418 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 DDX42Q86XP3 938 aaKnown RBP eCLIP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 IFT20Q8IY31 132 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 PHOSPHO2Q8TCD6 241 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 SP7Q8TDD2 431 aaPredicted RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 RNF139Q8WU17 664 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 RNF34Q969K3 372 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 PGAP3Q96FM1 320 aaPredicted RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 DPH5Q9H2P9 285 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 DNPEPQ9ULA0 475 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 EFR3BQ9Y2G0 817 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 SLC38A8A6NNN8 435 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 TEX28O15482 410 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 MYOGP15173 224 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 MCM3P25205 808 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 TUFMP49411 452 aaKnown RBP28.29■■■□□ 2.12
TRNP1-201ENST00000522111 CCNG2Q16589 344 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 ANKRD20A8PQ5CZ79 823 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 C9orf50Q5SZB4 431 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 SND1Q7KZF4 910 aaKnown RBP eCLIP28.29■■■□□ 2.12
TRNP1-201ENST00000522111 CASKIN2Q8WXE0 1202 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 CASP10Q92851 521 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 RNF157Q96PX1 679 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 GDF3Q9NR23 364 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 IL37Q9NZH6 218 aa28.29■■■□□ 2.12
TRNP1-201ENST00000522111 UTP11Q9Y3A2 253 aaKnown RBP28.29■■■□□ 2.12
TRNP1-201ENST00000522111 I6L893 689 aaPredicted RBP28.28■■■□□ 2.12
TRNP1-201ENST00000522111 TUBBP07437 444 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 CARSP49589 748 aaKnown RBP28.28■■■□□ 2.12
TRNP1-201ENST00000522111 EFHC2Q5JST6 749 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 HOMER3Q9NSC5 361 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 GRXCR1A8MXD5 290 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 LIASO43766 372 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 ECEL1O95672 775 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 SPATA31D3P0C874 917 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 PECAM1P16284 738 aaPredicted RBP28.28■■■□□ 2.12
TRNP1-201ENST00000522111 GOT1P17174 413 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 OTUD4Q01804 1114 aaKnown RBP28.28■■■□□ 2.12
TRNP1-201ENST00000522111 RAB33AQ14088 237 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 TPGS2Q68CL5 300 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 NPNTQ6UXI9 565 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 SPATA31D4Q6ZUB0 917 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 PCDH19Q8TAB3 1148 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 ACTL9Q8TC94 416 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 ZNF670Q9BS34 389 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 WDCPQ9H6R7 721 aa28.28■■■□□ 2.12
TRNP1-201ENST00000522111 PRRG1O14668 218 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 F9P00740 461 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 FAM109BQ6ICB4 259 aaPredicted RBP28.27■■■□□ 2.12
TRNP1-201ENST00000522111 CCNI2Q6ZMN8 369 aaPredicted RBP28.27■■■□□ 2.12
TRNP1-201ENST00000522111 BEND5Q7L4P6 421 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 TMC7Q7Z402 723 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 TKTL2Q9H0I9 626 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 SMOC2Q9H3U7 446 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 FBXW11Q9UKB1 542 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 CHD9Q3L8U1 2897 aa28.27■■■□□ 2.12
TRNP1-201ENST00000522111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.26■■■□□ 2.11
TRNP1-201ENST00000522111 FAM92AA1XBS5 289 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 DAPK3O43293 454 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CREB3O43889 395 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 ERLIN1O75477 346 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CTSAP10619 480 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 ADRA1BP35368 520 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 BYSLQ13895 437 aaKnown RBP28.26■■■□□ 2.11
TRNP1-201ENST00000522111 PPP1R7Q15435 360 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 RASIP1Q5U651 963 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 RUBCNQ92622 972 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 GDAP1L1Q96MZ0 367 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 C17orf80Q9BSJ5 609 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CWC15Q9P013 229 aaKnown RBP28.26■■■□□ 2.11
TRNP1-201ENST00000522111 RASAL2Q9UJF2 1139 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 NFU1Q9UMS0 254 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 YIPF1Q9Y548 306 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 IGLV3-25P01717 112 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CNPP09543 421 aaKnown RBP28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CXCR3P49682 368 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 C1orf228Q6PIY5 440 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 TMCO3Q6UWJ1 677 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 ARHGAP18Q8N392 663 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 PQLC3Q8N755 202 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 FAM71BQ8TC56 605 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 RUNDC3BQ96NL0 473 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 CSPG4P5Q96PW8 444 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 RAB17Q9H0T7 212 aa28.26■■■□□ 2.11
TRNP1-201ENST00000522111 LINC01553A4QN01 128 aa28.25■■■□□ 2.11
TRNP1-201ENST00000522111 FAM187AA6NFU0 413 aa28.25■■■□□ 2.11
TRNP1-201ENST00000522111 CCDC85CA6NKD9 419 aa28.25■■■□□ 2.11
TRNP1-201ENST00000522111 APOC4-APOC2K7ER74 178 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms