RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 NAP1L1P55209 391 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 RBM6P78332 1123 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 FAM189BP81408 668 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 GALNT2Q10471 571 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 RESTQ13127 1097 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 KRT32Q14532 448 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 RABL3Q5HYI8 236 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 TTLL5Q6EMB2 1281 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 C16orf54Q6UWD8 224 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 SYNE3Q6ZMZ3 975 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 KRTAP1-3Q8IUG1 177 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 FAM71DQ8N9W8 422 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 ANKRD52Q8NB46 1076 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 B3GALNT2Q8NCR0 500 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 LINS1Q8NG48 757 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 TBC1D22AQ8WUA7 517 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 GLG1Q92896 1179 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 FAR2Q96K12 515 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 PIGSQ96S52 555 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 PRDM13Q9H4Q3 707 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 ZNF768Q9H5H4 540 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 RMI1Q9H9A7 625 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 ORC3Q9UBD5 711 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 POLG2Q9UHN1 485 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 HSF4Q9ULV5 492 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 RNF114Q9Y508 228 aa5.6□□□□□ -1.51
CTNNA1-233ENST00000522052 M0QZQ0 153 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 SLC16A3O15427 465 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 HNRNPRO43390 633 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ZNF623O75123 536 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ZBED4O75132 1171 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 CDKL5O76039 1030 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 HEXIM1O94992 359 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 CSF1P09603 554 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 MMP8P22894 467 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ABCD3P28288 659 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 LIPAP38571 399 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 CCT4P50991 539 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 HNRNPMP52272 730 aaKnown RBP eCLIP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 BFSP2Q13515 415 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 GPR68Q15743 365 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 TSTQ16762 297 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 BEAN1Q3B7T3 259 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 CBWD5Q5RIA9 395 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 LIPMQ5VYY2 423 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ANKRD40Q6AI12 368 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 GRHL2Q6ISB3 625 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ARMC8Q8IUR7 673 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ANKRD44Q8N8A2 993 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 PTGR2Q8N8N7 351 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 NPIPB3Q92617 1050 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 STAMQ92783 540 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 EDAQ92838 391 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 FUBP1Q96AE4 644 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 ERP27Q96DN0 273 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 WDYHV1Q96HA8 205 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 RBM17Q96I25 401 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 VPS50Q96JG6 964 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 CNPY2Q9Y2B0 182 aa5.59□□□□□ -1.51
CTNNA1-233ENST00000522052 FSD2A1L4K1 749 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 SPTLC2O15270 562 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 NKX2-8O15522 239 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 PNPLA4P41247 253 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 RPL15P61313 204 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 RNASELQ05823 741 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 ITIH3Q06033 890 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 TOB2Q14106 344 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 LRRC24Q50LG9 513 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 HS1BP3Q53T59 392 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 TEDDM1Q5T9Z0 273 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 HAUS3Q68CZ6 603 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 MAVSQ7Z434 540 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 GALNT4Q8N4A0 578 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 CPEB3Q8NE35 698 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 LPIN2Q92539 896 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 CTHRC1Q96CG8 243 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 R3HDM4Q96D70 268 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 TOX2Q96NM4 488 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 PPP1R10Q96QC0 940 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 FUZQ9BT04 418 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 DPCDQ9BVM2 203 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 HERC2P3Q9BVR0 1158 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 RAB21Q9UL25 225 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 TRPC5Q9UL62 973 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 RCE1Q9Y256 329 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
CTNNA1-233ENST00000522052 TDRD9Q8NDG6 1382 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3EA0A087X179 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3KA0A087X1G2 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3BA6NDS4 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3FA6NER0 549 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 AGAP5A6NIR3 686 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 TBC1D3LB9A6J9 549 aa5.57□□□□□ -1.52
CTNNA1-233ENST00000522052 SPRY2O43597 315 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms