RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 LRRD1A4D1F6 860 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 MDM4O15151 490 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 MSI1O43347 362 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 IGLV3-25P01717 112 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 LRIT3Q3SXY7 679 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 PABPC1LQ4VXU2 614 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 HECTD3Q5T447 861 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 ERMARDQ5T6L9 678 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 ZNF697Q5TEC3 545 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 CYP4V2Q6ZWL3 525 aaPredicted RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 CCDC185Q8N715 623 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 KCTD6Q8NC69 237 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 RAPGEF5Q92565 580 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 PPP2R3CQ969Q6 453 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 LRCH3Q96II8 777 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 SERPINB11Q96P15 392 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 CDK5RAP1Q96SZ6 601 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 SNRNP25Q9BV90 132 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 NACA2Q9H009 215 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 IGFLR1Q9H665 355 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 WDR6Q9NNW5 1121 aaKnown RBP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 GPATCH2LQ9NWQ4 482 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 SMARCAL1Q9NZC9 954 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 RASAL2Q9UJF2 1139 aa22.24■■□□□ 1.15
R3HCC1-208ENST00000522012 IRAK2O43187 625 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 F11P03951 625 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 HNRNPA1P09651 372 aaKnown RBP eCLIP22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 PAFAH1B1P43034 410 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 CXCR3P49682 368 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 RBM10P98175 930 aaKnown RBP22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 TADA2BQ86TJ2 420 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 MIB1Q86YT6 1006 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 TEKT4Q8WW24 435 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 RBM41Q96IZ5 413 aaKnown RBP22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 WDCPQ9H6R7 721 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 IL21Q9HBE4 155 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 MARCH2Q9P0N8 246 aa22.23■■□□□ 1.15
R3HCC1-208ENST00000522012 XYLBO75191 536 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 TADA3O75528 432 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 MYL4P12829 197 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 GABRR2P28476 465 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 HOXA9P31269 272 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 GTF2F1P35269 517 aaKnown RBP eCLIP22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 CETN2P41208 172 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 LLGL1Q15334 1064 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 ZC3H12AQ5D1E8 599 aaKnown RBP22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 TMEM150AQ86TG1 271 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 TMC8Q8IU68 726 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 CMASQ8NFW8 434 aaPredicted RBP22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 CDCA3Q99618 268 aaPredicted RBP22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 LRRC3Q9BY71 257 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 ASAH2Q9NR71 780 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 ZDHHC7Q9NXF8 308 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 RNF14Q9UBS8 474 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 FZD10Q9ULW2 581 aa22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 LAMA2P24043 3122 aaKnown RBP22.22■■□□□ 1.15
R3HCC1-208ENST00000522012 PTPN2P17706 415 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ATP5C1P36542 298 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 KRT81Q14533 505 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ARL13BQ3SXY8 428 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 RASGEF1CQ8N431 466 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ZNF276Q8N554 614 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 GCNAQ96QF7 691 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 DHX35Q9H5Z1 703 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 NSUN3Q9H649 340 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 TMPRSS4Q9NRS4 437 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 HCFC1R1Q9NWW0 138 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 DNMT3LQ9UJW3 386 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 AP4E1Q9UPM8 1137 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CCDC195A0A1B0GUA6 201 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 SLC12A8A0AV02 714 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 C2orf78A6NCI8 922 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 PGRMC1O00264 195 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 PDE2AO00408 941 aaPredicted RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 COCHO43405 550 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 FGGP02679 453 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 KDELR1P24390 212 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CCR1P32246 355 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ADRA1BP35368 520 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CDH6P55285 790 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 TBX4P57082 545 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CKAP4Q07065 602 aaKnown RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 EIF4EBP2Q13542 120 aaPredicted RBP22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CA9Q16790 459 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 LONRF2Q1L5Z9 754 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 MFSD7Q6UXD7 560 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 SPOCD1Q6ZMY3 1216 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ACTRT1Q8TDG2 376 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 CARD6Q9BX69 1037 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 PRKD2Q9BZL6 878 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 TKTL2Q9H0I9 626 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 ATXN3LQ9H3M9 355 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 PRDM12Q9H4Q4 367 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 TRPC7Q9HCX4 862 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 TLR6Q9Y2C9 796 aa22.21■■□□□ 1.15
R3HCC1-208ENST00000522012 PLXNA3P51805 1871 aa22.2■■□□□ 1.14
R3HCC1-208ENST00000522012 CD48P09326 243 aa22.2■■□□□ 1.14
R3HCC1-208ENST00000522012 CDC25CP30307 473 aa22.2■■□□□ 1.14
R3HCC1-208ENST00000522012 TUBP50607 506 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms