RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PTGIRP43119 386 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 GRIA4P48058 902 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 TAF6P49848 677 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 UCNP55089 124 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 LINC00303Q3SY05 128 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 C4orf17Q53FE4 359 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 RINT1Q6NUQ1 792 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 FAM171BQ6P995 826 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 INO80CQ6PI98 192 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 SCN4BQ8IWT1 228 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 BBS7Q8IWZ6 715 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 SAP25Q8TEE9 199 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 TTLL2Q9BWV7 592 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 OSGEPQ9NPF4 335 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 SPHK2Q9NRA0 654 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 CPSF3Q9UKF6 684 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 L1RE1Q9UN81 338 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 KIAA1024Q9UPX6 916 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZFHX3Q15911 3703 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 CELSR2Q9HCU4 2923 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TTLL8A6PVC2 850 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 E9PMD0 336 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 GFRA2O00451 464 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 CPLX1O14810 134 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 KLK10O43240 276 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ATP2C2O75185 946 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 AFPP02771 609 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 CDK4P11802 303 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 GLDCP23378 1020 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ACSL1P33121 698 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 PDE6CP51160 858 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 COPAP53621 1224 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 PCBP4P57723 403 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TSPY1Q01534 308 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 STK3Q13188 491 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ENPP2Q13822 863 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TMEM132DQ14C87 1099 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 SDE2Q6IQ49 451 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 SLC39A4Q6P5W5 647 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 KCNK18Q7Z418 384 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TMPRSS6Q8IU80 811 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF274Q96GC6 653 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 SPATA17Q96L03 361 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF578Q96N58 590 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 NUP58Q9BVL2 599 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 ALG2Q9H553 416 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 RPF1Q9H9Y2 349 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TMEM30AQ9NV96 361 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TRPM5Q9NZQ8 1165 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TBC1D14Q9P2M4 693 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 CLCA2Q9UQC9 943 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 STON1Q9Y6Q2 735 aa9.45□□□□□ -0.9
TRAPPC9-212ENST00000521944 TCHHQ07283 1943 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 A0A0B4J269 797 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 GABRDO14764 452 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 OGTO15294 1046 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 EFSO43281 561 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 CACNG3O60359 315 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 MPOP05164 745 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 MUTP22033 750 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 OXTRP30559 389 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 MCM7P33993 719 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 MAGEA11P43364 429 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 STRN3Q13033 797 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 ANO4Q32M45 955 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 BROXQ5VW32 411 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 BTBD8Q5XKL5 378 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 GRAMD4Q6IC98 578 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 ATG14Q6ZNE5 492 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 ADGRF2Q8IZF7 708 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 EID2Q8N6I1 236 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 ENGASEQ8NFI3 743 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 CXorf38Q8TB03 319 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 BIRC7Q96CA5 298 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 OTUB2Q96DC9 234 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 FUBP3Q96I24 572 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 FAM84AQ96KN4 292 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 DUSP9Q99956 384 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 C17orf75Q9HAS0 396 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 ASCL3Q9NQ33 180 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 DNAJC17Q9NVM6 304 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 DPP3Q9NY33 737 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 SRPK3Q9UPE1 567 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 MAN2B2Q9Y2E5 1009 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 DERAQ9Y315 318 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 PCDHB6Q9Y5E3 794 aa9.44□□□□□ -0.9
TRAPPC9-212ENST00000521944 CKAP5Q14008 2032 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 A0A1W2PNU3 283 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 COCHO43405 550 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 TSPAN3O60637 253 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms