RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GABBR1Q9UBS5 961 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 NOB1Q9ULX3 412 aaKnown RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 PTPRCP08575 1304 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 COL15A1P39059 1388 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 SCN11AQ9UI33 1791 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PI4KAP2A4QPH2 592 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 WIPF3A6NGB9 483 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 CGB1A6NKQ9 187 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 BTN3A1O00481 513 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 CTNND1O60716 968 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TJP3O95049 919 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PARNO95453 639 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 FESP07332 822 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 MMP10P09238 476 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ENGP17813 658 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 CLCN2P51788 898 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ARFIP2P53365 341 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ATXN1P54253 815 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PRKAG1P54619 331 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TUBA4AP68366 448 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PPP2R5AQ15172 486 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PARP10Q53GL7 1025 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 LRCH2Q5VUJ6 765 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 SUSD4Q5VX71 490 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TBC1D9BQ66K14 1250 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 B3GNT9Q6UX72 402 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 GAS2L3Q86XJ1 694 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TPH2Q8IWU9 490 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ZNF34Q8IZ26 560 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 SLC15A4Q8N697 577 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 PI4KAP1Q8N8J0 262 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 XAGE5Q8WWM1 108 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 DNAAF4Q8WXU2 420 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 DPF1Q92782 380 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 GLG1Q92896 1179 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 DAZAP1Q96EP5 407 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 CCDC136Q96JN2 1154 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TAAR9Q96RI9 348 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 P2RX7Q99572 595 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 MESP1Q9BRJ9 268 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 FSD1LQ9BXM9 530 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 RTFDC1Q9BY42 306 aaPredicted RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TRIM54Q9BYV2 358 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 API5Q9BZZ5 524 aaKnown RBP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 NRIP3Q9NQ35 241 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 STAP2Q9UGK3 403 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 ADAMTS5Q9UNA0 930 aa3.84□□□□□ -1.79
VPS13B-209ENST00000521559 NIP7Q9Y221 180 aaKnown RBP eCLIP3.84□□□□□ -1.79
VPS13B-209ENST00000521559 TNS1Q9HBL0 1735 aaKnown RBP3.84□□□□□ -1.8
VPS13B-209ENST00000521559 BTAF1O14981 1849 aa3.84□□□□□ -1.8
VPS13B-209ENST00000521559 A0A087WWL8 130 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 GOLGA6CA6NDK9 693 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 GOLGA6BA6NDN3 693 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 PSMD9O00233 223 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 TUSC2O75896 110 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 SERPINB2P05120 415 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 IGKV5-2P06315 115 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 GOLGA6DP0CG33 693 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 GPTP24298 496 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 DGKEP52429 567 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 AGFG1P52594 562 aaKnown RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 TFF2Q03403 129 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 DDR1Q08345 913 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 NEXNQ0ZGT2 675 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 MYO1EQ12965 1108 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 SLC13A2Q13183 592 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 MINDY4Q4G0A6 757 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 TMEM119Q4V9L6 283 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 SLC10A5Q5PT55 438 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 TMEM63BQ5T3F8 832 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 BEND3Q5T5X7 828 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 PRAMEF17Q5VTA0 474 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ATF7IPQ6VMQ6 1270 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 Q6ZWC4 215 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 PPP1R42Q7Z4L9 355 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 RAB11FIP4Q86YS3 637 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 CELF5Q8N6W0 485 aaKnown RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 VGLL2Q8N8G2 317 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 CCDC191Q8NCU4 936 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 LINS1Q8NG48 757 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 SOCS4Q8WXH5 440 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 FRAT1Q92837 279 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 R3HDM4Q96D70 268 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 MYD88Q99836 296 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 UTP14AQ9BVJ6 771 aaKnown RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 DPH1Q9BZG8 443 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF518BQ9C0D4 1074 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 NYXQ9GZU5 481 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 MS4A7Q9GZW8 240 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 CWC25Q9NXE8 425 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 GOLGA6AQ9NYA3 693 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-209ENST00000521559 SERGEFQ9UGK8 458 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 RNF123Q5XPI4 1314 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 KIF16BQ96L93 1317 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ADCY9O60503 1353 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 PAPPAQ13219 1627 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF831Q5JPB2 1677 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms