RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PLD4Q96BZ4 506 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 PNKPQ96T60 521 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 DCLK3Q9C098 648 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 AGO1Q9UL18 857 aaKnown RBP21.58■■□□□ 1.05
TRIM35-203ENST00000521253 ZNF510Q9Y2H8 683 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 HBS1LQ9Y450 684 aaKnown RBP21.58■■□□□ 1.05
TRIM35-203ENST00000521253 SMTNL1A8MU46 457 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 PROB1E7EW31 1015 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 MSI1O43347 362 aaKnown RBP21.57■■□□□ 1.04
TRIM35-203ENST00000521253 FYNP06241 537 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 POLR2FP61218 127 aaKnown RBP21.57■■□□□ 1.04
TRIM35-203ENST00000521253 UBXN1Q04323 297 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 PPP2R5DQ14738 602 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 TPGS1Q6ZTW0 290 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 DENND1CQ8IV53 801 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 SFTPA1Q8IWL2 248 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 NELL1Q92832 810 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 FAM149B1Q96BN6 582 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 PPP1R13BQ96KQ4 1090 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 CPXM1Q96SM3 734 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 BBS2Q9BXC9 721 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 ARHGEF4Q9NR80 690 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 MARK1Q9P0L2 795 aa21.57■■□□□ 1.04
TRIM35-203ENST00000521253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.56■■□□□ 1.04
TRIM35-203ENST00000521253 NEDD8-MDP1E9PL57 170 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 K7EQS6 105 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 TULP3O75386 442 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 KAT7O95251 611 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 PAPSS2O95340 614 aaPredicted RBP21.56■■□□□ 1.04
TRIM35-203ENST00000521253 NCAM1P13591 858 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 KDSRQ06136 332 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 ZC3H14Q6PJT7 736 aaKnown RBP21.56■■□□□ 1.04
TRIM35-203ENST00000521253 PHTF2Q8N3S3 785 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 P2RY11Q96G91 374 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 PCMTD1Q96MG8 357 aaPredicted RBP21.56■■□□□ 1.04
TRIM35-203ENST00000521253 ERGIC2Q96RQ1 377 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 WDR35Q9P2L0 1181 aa21.56■■□□□ 1.04
TRIM35-203ENST00000521253 ANTXRLA6NF34 631 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 CHURC1-FNTBB4DL54 471 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 K7ESF4 209 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 ATG13O75143 517 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 TYRP14679 529 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 CHKAP35790 457 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 GRIA2P42262 883 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 MRE11P49959 708 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 SEC13P55735 322 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 JAM2P57087 298 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 TAF3Q5VWG9 929 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 NOP9Q86U38 636 aaKnown RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 ALYREFQ86V81 257 aaKnown RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 RPLP0P6Q8NHW5 317 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 DQX1Q8TE96 717 aaKnown RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 DDX1Q92499 740 aaKnown RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 BHMTQ93088 406 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 PIWIL1Q96J94 861 aaKnown RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 NOX5Q96PH1 765 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 NLRC4Q9NPP4 1024 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 POLR3BQ9NW08 1133 aaPredicted RBP21.55■■□□□ 1.04
TRIM35-203ENST00000521253 ZSCAN32Q9NX65 697 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 DEC1Q9P2X7 70 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 NAALADL1Q9UQQ1 740 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 DAAM1Q9Y4D1 1078 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 CEP83Q9Y592 693 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 MYOFQ9NZM1 2061 aa21.55■■□□□ 1.04
TRIM35-203ENST00000521253 A0A0A0MRY4 1105 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 TRIM24O15164 1050 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 CACNG3O60359 315 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 GFPT2O94808 682 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 APODP05090 189 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 HOXC13P31276 330 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 HOXD11P31277 338 aaPredicted RBP21.54■■□□□ 1.04
TRIM35-203ENST00000521253 HARS2P49590 506 aaKnown RBP21.54■■□□□ 1.04
TRIM35-203ENST00000521253 IQCB1Q15051 598 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 PTPN20Q4JDL3 420 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 BEND5Q7L4P6 421 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 ZBTB44Q8NCP5 570 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 NEK11Q8NG66 645 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 CCDC26Q8TAB7 109 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 EPS8L1Q8TE68 723 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 TRIM62Q9BVG3 475 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 FAM126AQ9BYI3 521 aaPredicted RBP21.54■■□□□ 1.04
TRIM35-203ENST00000521253 PDCL3Q9H2J4 239 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 PLK2Q9NYY3 685 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 PCDHGA2Q9Y5H1 932 aa21.54■■□□□ 1.04
TRIM35-203ENST00000521253 IGLV3-27P01718 113 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 ERBB2P04626 1255 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 YWHAZP63104 245 aaKnown RBP21.53■■□□□ 1.04
TRIM35-203ENST00000521253 TAF5Q15542 800 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 C2orf27AQ580R0 203 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 SYPL2Q5VXT5 272 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 FAM217AQ8IXS0 508 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 TMEM35BQ8NCS4 154 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 USP33Q8TEY7 942 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 ATRIPQ8WXE1 791 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 NKD2Q969F2 451 aaPredicted RBP21.53■■□□□ 1.04
TRIM35-203ENST00000521253 XPO6Q96QU8 1125 aaKnown RBP21.53■■□□□ 1.04
TRIM35-203ENST00000521253 SPAG5Q96R06 1193 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 POPDC2Q9HBU9 364 aa21.53■■□□□ 1.04
TRIM35-203ENST00000521253 DNAJC17Q9NVM6 304 aaKnown RBP21.53■■□□□ 1.04
TRIM35-203ENST00000521253 FRYLO94915 3013 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms