RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 STAP1Q9ULZ2 295 aa18.17■□□□□ 0.5
TRAM1-203ENST00000520700 CCL26Q9Y258 94 aa18.17■□□□□ 0.5
TRAM1-203ENST00000520700 MYO16Q9Y6X6 1858 aa18.17■□□□□ 0.5
TRAM1-203ENST00000520700 TMEM191CA6NGB0 347 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 LEFTY2O00292 366 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 GREM1O60565 184 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 GRAP2O75791 330 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 TRUB2O95900 331 aaKnown RBP18.16■□□□□ 0.5
TRAM1-203ENST00000520700 GBP1P32455 592 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 RNASE9P60153 205 aaKnown RBP18.16■□□□□ 0.5
TRAM1-203ENST00000520700 SPA17Q15506 151 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 TRNP1Q6NT89 227 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 JOSD2Q8TAC2 188 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 CENPIQ92674 756 aaPredicted RBP18.16■□□□□ 0.5
TRAM1-203ENST00000520700 AZIN2Q96A70 460 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 PLD4Q96BZ4 506 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 SLC39A13Q96H72 371 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 LRRC3BQ96PB8 259 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 LUC7LQ9NQ29 371 aaKnown RBP18.16■□□□□ 0.5
TRAM1-203ENST00000520700 GKN1Q9NS71 199 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 UVRAGQ9P2Y5 699 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 SFMBT1Q9UHJ3 866 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 RASAL2Q9UJF2 1139 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 TLR6Q9Y2C9 796 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 NUMBLQ9Y6R0 609 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 NUP210Q8TEM1 1887 aaPredicted RBP18.16■□□□□ 0.5
TRAM1-203ENST00000520700 C5orf42Q9H799 3197 aa18.16■□□□□ 0.5
TRAM1-203ENST00000520700 SLC12A8A0AV02 714 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 MDM4O15151 490 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 ARHGAP6O43182 974 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 IRAK2O43187 625 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PDGFRAP16234 1089 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PSMC3P17980 439 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 ABCB4P21439 1286 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 SP100P23497 879 aaPredicted RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 MAGEA1P43355 309 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 ZNF143P52747 638 aaPredicted RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 MTA1Q13330 715 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 VITQ6UXI7 678 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PHLDB2Q86SQ0 1253 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 TAC4Q86UU9 113 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 MIB1Q86YT6 1006 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 SLC44A3Q8N4M1 653 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 RXFP2Q8WXD0 754 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 CTNNBL1Q8WYA6 563 aaPredicted RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 OTUB2Q96DC9 234 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PPP1R9BQ96SB3 815 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 RPP25Q9BUL9 199 aaKnown RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PLA2G2FQ9BZM2 168 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 SMG9Q9H0W8 520 aaKnown RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 THG1LQ9NWX6 298 aaKnown RBP18.15■□□□□ 0.5
TRAM1-203ENST00000520700 ZNF510Q9Y2H8 683 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 PCDHA13Q9Y5I0 950 aa18.15■□□□□ 0.5
TRAM1-203ENST00000520700 FAM170AA1A519 330 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 STC2O76061 302 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.49
TRAM1-203ENST00000520700 LATS1O95835 1130 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 SLC2A3P11169 496 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 GPD1P21695 349 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 SDC4P31431 198 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 RPL7AP62424 266 aaKnown RBP18.14■□□□□ 0.49
TRAM1-203ENST00000520700 KRT83P78385 493 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 MTF1Q14872 753 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 ACAP1Q15027 740 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 CCDC14Q49A88 953 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 ARHGAP29Q52LW3 1261 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 OTUD1Q5VV17 481 aaPredicted RBP18.14■□□□□ 0.49
TRAM1-203ENST00000520700 DCUN1D2Q6PH85 259 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 Q6ZNB5 142 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 STRADAQ7RTN6 431 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 UNC45BQ8IWX7 931 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 GJD3Q8N144 294 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 EMC1Q8N766 993 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 CNPY3Q9BT09 278 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 PACSIN1Q9BY11 444 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 TRPV5Q9NQA5 729 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAM1-203ENST00000520700 SMPD4Q9NXE4 827 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 CFAP97Q9P2B7 532 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 TBC1D14Q9P2M4 693 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 LCMT1Q9UIC8 334 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 STOML2Q9UJZ1 356 aa18.14■□□□□ 0.49
TRAM1-203ENST00000520700 M0QYT0 321 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 SLC9A3R1O14745 358 aaPredicted RBP18.13■□□□□ 0.49
TRAM1-203ENST00000520700 CHADO15335 359 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 NRDCO43847 1150 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 MTA2O94776 668 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 CXCR3P49682 368 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 TBX4P57082 545 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 PITX1P78337 314 aaPredicted RBP18.13■□□□□ 0.49
TRAM1-203ENST00000520700 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 TDGQ13569 410 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 PPP2R5DQ14738 602 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 NUGGCQ68CJ6 796 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 RHOT2Q8IXI1 618 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 RIN3Q8TB24 985 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 ARHGEF26Q96DR7 871 aa18.13■□□□□ 0.49
TRAM1-203ENST00000520700 FCRL2Q96LA5 508 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms