RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ACKR2O00590 384 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 ABLIM1O14639 778 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 HOXC11O43248 304 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 FBXO45P0C2W1 286 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 CISD3P0C7P0 127 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 LIG1P18858 919 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 RXRGP48443 463 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 C21orf59P57076 290 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 RACK1P63244 317 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 SPAG1Q07617 926 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 MRPL49Q13405 166 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 ENPP2Q13822 863 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 CTTNQ14247 550 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 BORAQ6PGQ7 559 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 CWC27Q6UX04 472 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 MAEAQ7L5Y9 396 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 C4orf19Q8IY42 314 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 NSUN7Q8NE18 718 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 C9orf43Q8TAL5 461 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 ARRDC3Q96B67 414 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 KIFC3Q9BVG8 833 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 OXCT2Q9BYC2 517 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 PCED1AQ9H1Q7 454 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 CDT1Q9H211 546 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 SLC38A7Q9NVC3 462 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 UCKL1Q9NWZ5 548 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 ABI2Q9NYB9 513 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 CFAP97Q9P2B7 532 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 DEC1Q9P2X7 70 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 DAAM1Q9Y4D1 1078 aa7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 ERICH2A1L162 156 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 PRR19A6NJB7 356 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 E7EWF7 191 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 SH2B2O14492 632 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 HNRNPRO43390 633 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 VPS4BO75351 444 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ITGA2BP08514 1039 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 CKMT1AP12532 417 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 TYMPP19971 482 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 GPC1P35052 558 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 NXPH1P58417 271 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 KCNJ12Q14500 433 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ZXDCQ2QGD7 858 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 SLC10A6Q3KNW5 377 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 DCAF4L1Q3SXM0 396 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 Q4G0T1 1027 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 SEZ6Q53EL9 994 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 RNFT1Q5M7Z0 435 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 LYSMD3Q7Z3D4 306 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ADAT2Q7Z6V5 191 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 C14orf80Q86SX3 495 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 USP37Q86T82 979 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ZFAND4Q86XD8 727 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 EXOC8Q8IYI6 725 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 FANCBQ8NB91 859 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 TRMT2BQ96GJ1 504 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 DYDC2Q96IM9 177 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ACE2Q9BYF1 805 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ACSL6Q9UKU0 697 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 VPS4AQ9UN37 437 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 CPQQ9Y646 472 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 TRIP11Q15643 1979 aa7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 PRRC2CQ9Y520 2896 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-216ENST00000519489 ESPL1Q14674 2120 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 CDC14CA4D256 554 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 GFRA2O00451 464 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SLC37A4O43826 429 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SEMA4FO95754 770 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 OLFM2O95897 454 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 P4HBP07237 508 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 CSH1P0DML2 217 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 CSH2P0DML3 217 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 HGFP14210 728 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 LRPAP1P30533 357 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 PDE1AP54750 535 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SLC7A9P82251 487 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 GAD2Q05329 585 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 KCNB1Q14721 858 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SDE2Q6IQ49 451 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 ARMCX5Q6P1M9 558 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 TIPARPQ7Z3E1 657 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 DTX1Q86Y01 620 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SLC34A3Q8N130 599 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 REXO1Q8N1G1 1221 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 VWA5B2Q8N398 1253 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 ARL14Q8N4G2 192 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 ZNF276Q8N554 614 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 PRCCQ92733 491 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 SENP8Q96LD8 212 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 ADPGKQ9BRR6 497 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 ZMYND12Q9H0C1 365 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 POLD4Q9HCU8 107 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 PPM1HQ9ULR3 514 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 PCDHGA7Q9Y5G6 932 aa7.25□□□□□ -1.25
CTNNA1-216ENST00000519489 CYP3A7-CYP3A51PA0A087WV96 503 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms