RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SFTPA1Q8IWL2 248 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 ZC3H3Q8IXZ2 948 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 TERB1Q8NA31 727 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 TMEM176AQ96HP8 235 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 TSG101Q99816 390 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 CISHQ9NSE2 258 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 COQ4Q9Y3A0 265 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 STARD13Q9Y3M8 1113 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
TRAPPC9-206ENST00000519482 CACNG3O60359 315 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 RALAP11233 206 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.323e-7■■■■□ 21.2
TRAPPC9-206ENST00000519482 P2RY2P41231 377 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 STPG1Q5TH74 334 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 ARHGAP17Q68EM7 881 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 SCD5Q86SK9 330 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 EEF2KMTQ96G04 330 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 RXFP3Q9NSD7 469 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZNF510Q9Y2H8 683 aa13.08□□□□□ -0.32
TRAPPC9-206ENST00000519482 NEDD8-MDP1E9PL57 170 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 TM4SF5O14894 197 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 ADAM23O75077 832 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 TYRP14679 529 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 RAD23BP54727 409 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 SLC8A3P57103 927 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 COG7P83436 770 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 TCERG1LQ5VWI1 586 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 Q6ZNB5 142 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 ARHGAP18Q8N392 663 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 BBS2Q9BXC9 721 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 SMOC1Q9H4F8 434 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 INVSQ9Y283 1065 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 PI4KAP42356 2102 aa13.07□□□□□ -0.32
TRAPPC9-206ENST00000519482 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 PSMA7O14818 248 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 MDM4O15151 490 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 STC2O76061 302 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 TUBB4AP04350 444 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 BCKDHBP21953 392 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 NTSR1P30989 418 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 PAK1Q13153 545 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CUL2Q13617 745 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 NR1I3Q14994 352 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CDKAL1Q5VV42 579 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ANKRD40Q6AI12 368 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 FOXR2Q6PJQ5 311 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 TPGS1Q6ZTW0 290 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CYP2U1Q7Z449 544 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 CCDC112Q8NEF3 446 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 TATDN2Q93075 761 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ARID3AQ99856 593 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 DCLK3Q9C098 648 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZDHHC4Q9NPG8 344 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 ACACBO00763 2458 aa13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-206ENST00000519482 KHNYNO15037 678 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms