RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SPEM2Q0P670 501 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 HSF5Q4G112 596 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 DENND1BQ6P3S1 775 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 TRIM65Q6PJ69 517 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 GBP6Q6ZN66 633 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 TOGARAM2Q6ZUX3 1019 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 CEP68Q76N32 757 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 KBTBD6Q86V97 674 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 RASSF3Q86WH2 238 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 DENND1CQ8IV53 801 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 GPR161Q8N6U8 529 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 TXNDC5Q8NBS9 432 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 GPT2Q8TD30 523 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 CLEC4CQ8WTT0 213 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 EDEM1Q92611 657 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 ACDQ96AP0 544 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 ZC3H10Q96K80 434 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 XPO6Q96QU8 1125 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 HINFPQ9BQA5 517 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 DCLK3Q9C098 648 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 THAP9Q9H5L6 903 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 SAMSN1Q9NSI8 373 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 RAB23Q9ULC3 237 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 CLEC4EQ9ULY5 219 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 INVSQ9Y283 1065 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 GTPBP10A4D1E9 387 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 TTC36A6NLP5 189 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 FOXN3O00409 490 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 DCLK1O15075 740 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CACNG3O60359 315 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 RPP40O75818 363 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 APBB3O95704 486 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 PENKP01210 267 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 KRT5P13647 590 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CORO1AP31146 461 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 ID4P47928 161 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 DGKEP52429 567 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 TPD52L1Q16890 204 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 ARHGAP44Q17R89 818 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 EXOC3L4Q17RC7 722 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 PREPLQ4J6C6 727 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CT47A1Q5JQC4 288 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 MIIPQ5JXC2 388 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 FYB2Q5VWT5 728 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 ENOSF1Q7L5Y1 443 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CACNA2D4Q7Z3S7 1137 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 FMNL3Q8IVF7 1028 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 FAM217AQ8IXS0 508 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CPXM2Q8N436 756 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 TERB1Q8NA31 727 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 STK32AQ8WU08 396 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 RNF139Q8WU17 664 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 IRGQQ8WZA9 623 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 BHMTQ93088 406 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 RMDN1Q96DB5 314 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 ACOX2Q99424 681 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 MIS12Q9H081 205 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 DUSP15Q9H1R2 295 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 NDST4Q9H3R1 872 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 OLA1Q9NTK5 396 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 DNAJC17Q9NVM6 304 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 CYTH4Q9UIA0 394 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 AJAP1Q9UKB5 411 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 GMEB2Q9UKD1 530 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 STRIP2Q9ULQ0 834 aa9.77□□□□□ -0.85
HDAC3-215ENST00000519474 HBS1LQ9Y450 684 aaKnown RBP9.77□□□□□ -0.85
HDAC3-215ENST00000519474 WASH3PC4AMC7 463 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 M0QYV0 167 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 GFRA2O00451 464 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 LTFP02788 710 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 CLCN1P35523 988 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 WASP42768 502 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 DGKGP49619 791 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 MAN2A1Q16706 1144 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 PLK5Q496M5 336 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 HSP90AA4PQ58FG1 418 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 EOGTQ5NDL2 527 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 C10orf76Q5T2E6 689 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 SYPL2Q5VXT5 272 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 GRAMD4Q6IC98 578 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 MSANTD2Q6P1R3 559 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 RBM43Q6ZSC3 357 aaKnown RBP9.76□□□□□ -0.85
HDAC3-215ENST00000519474 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 TMEM110Q86TL2 294 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 SIX6OS1Q8N1H7 587 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 ZNF513Q8N8E2 541 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-215ENST00000519474 TSTD1Q8NFU3 115 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 OLIG1Q8TAK6 271 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 SHC3Q92529 594 aa9.76□□□□□ -0.85
HDAC3-215ENST00000519474 PLD4Q96BZ4 506 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms