RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 OTUD7AQ8TE49 926 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-203ENST00000518638 FGF13Q92913 245 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 FGF14Q92915 247 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 MSANTD3Q96H12 275 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 VN1R3Q9BXE9 311 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 GLT8D2Q9H1C3 349 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 RSAD1Q9HA92 442 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DIAPH3Q9NSV4 1193 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 SMPD4Q9NXE4 827 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DTLQ9NZJ0 730 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DNAJB4Q9UDY4 337 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DSEQ9UL01 958 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 PIN4Q9Y237 131 aaKnown RBP6.79□□□□□ -1.32
CCDC6-203ENST00000518638 MTF2Q9Y483 593 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-203ENST00000518638 CCDC66A2RUB6 948 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 hCG_1984214I3L0E3 225 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 IPO5O00410 1097 aaKnown RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 NRP1O14786 923 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 TGM5O43548 720 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ECI2O75521 394 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 KCNK5O95279 499 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PAPSS2O95340 614 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF806P0C7X5 589 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CALM1P0DP23 149 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CALM2P0DP24 149 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CALM3P0DP25 149 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 TDGF1P13385 188 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CXCL12P48061 93 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 HMGA2P52926 109 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 EPHA5P54756 1037 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ITGB3BPQ13352 177 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 LRRC32Q14392 662 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 GPR19Q15760 415 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CR1LQ2VPA4 569 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PPM1LQ5SGD2 360 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PDXDC1Q6P996 788 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 FERMT3Q86UX7 667 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 RNF168Q8IYW5 571 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF713Q8N859 430 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 SH3RF2Q8TEC5 729 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PIBF1Q8WXW3 757 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 JPH2Q9BR39 696 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 YIPF4Q9BSR8 244 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 COLEC11Q9BWP8 271 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 LSM14BQ9BX40 385 aaKnown RBP6.78□□□□□ -1.32
CCDC6-203ENST00000518638 RXFP3Q9NSD7 469 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 NRBP2Q9NSY0 501 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CATSPERZQ9NTU4 200 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 GDE1Q9NZC3 331 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 ANKFY1Q9P2R3 1169 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 CBLCQ9ULV8 474 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PCDHGA5Q9Y5G8 931 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 PCDHA10Q9Y5I2 948 aa6.78□□□□□ -1.32
CCDC6-203ENST00000518638 FASNP49327 2511 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CCDC194A0A1B0GVG4 234 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SRRM3A6NNA2 597 aaPredicted RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 DDX39AO00148 427 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 TPD52L2O43399 206 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 DNAJC8O75937 253 aaPredicted RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 NPTXRO95502 500 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CCNE2O96020 404 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 AMY2AP04746 511 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 AMY2BP19961 511 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SDSP20132 328 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CD72P21854 359 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 HOXA6P31267 233 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SREBF1P36956 1147 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 OR1G1P47890 313 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 TUSC3Q13454 348 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CRY1Q16526 586 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 UBE2SQ16763 222 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 NT5DC1Q5TFE4 455 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 STPG1Q5TH74 334 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 DAB2IPQ5VWQ8 1189 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CD300LDQ6UXZ3 194 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 ARHGAP36Q6ZRI8 547 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 CATSPER4Q7RTX7 472 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 GRASPQ7Z6J2 395 aaPredicted RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 HACE1Q8IYU2 909 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SPEM1Q8N4L4 309 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 LRRC71Q8N4P6 559 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 FAM26EQ8N5C1 309 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 NCOA7Q8NI08 942 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 ZCCHC14Q8WYQ9 949 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 LPPQ93052 612 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 TOE1Q96GM8 510 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 MBOAT7Q96N66 472 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 PCDH18Q9HCL0 1135 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 TRPV5Q9NQA5 729 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 FBXW11Q9UKB1 542 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 NDRG2Q9UN36 371 aaKnown RBP6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SRPK3Q9UPE1 567 aa6.77□□□□□ -1.33
CCDC6-203ENST00000518638 SF3B1O75533 1304 aaKnown RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms