RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SNF8Q96H20 258 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 ZNF670Q9BS34 389 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 VN1R3Q9BXE9 311 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 CRISPLD1Q9H336 500 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 SLC27A5Q9Y2P5 690 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 ATP8A1Q9Y2Q0 1164 aa24.28■■□□□ 1.48
SLIT3-204ENST00000518140 SGK1O00141 431 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 IVLP07476 585 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 ATF2P15336 505 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 GOT1P17174 413 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 ALDH7A1P49419 539 aaKnown RBP24.27■■□□□ 1.48
SLIT3-204ENST00000518140 ITGA8P53708 1063 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 LMNB2Q03252 620 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 TFDP2Q14188 446 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 NFE2Q16621 373 aaPredicted RBP24.27■■□□□ 1.48
SLIT3-204ENST00000518140 SLC9A4Q6AI14 798 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.27■■□□□ 1.48
SLIT3-204ENST00000518140 CSPG4P5Q96PW8 444 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 DDIT4Q9NX09 232 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 MFHAS1Q9Y4C4 1052 aa24.27■■□□□ 1.48
SLIT3-204ENST00000518140 IFNB1P01574 187 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 ITIH2P19823 946 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 UBAP2Q5T6F2 1119 aaKnown RBP24.26■■□□□ 1.47
SLIT3-204ENST00000518140 RHBDF2Q6PJF5 856 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 SCD5Q86SK9 330 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 ZC3H18Q86VM9 953 aaKnown RBP24.26■■□□□ 1.47
SLIT3-204ENST00000518140 CCDC89Q8N998 374 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 PWWP2AQ96N64 755 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 TTPALQ9BTX7 342 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 ETNK2Q9NVF9 386 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 PCDHB5Q9Y5E4 795 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 HEY1Q9Y5J3 304 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 LAMA2P24043 3122 aaKnown RBP24.26■■□□□ 1.47
SLIT3-204ENST00000518140 COL4A6Q14031 1691 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 OR6C75A6NL08 312 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 APOL1O14791 398 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 ADAM12O43184 909 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 RNF40O75150 1001 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 PPFIA2O75334 1257 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 AMPD1P23109 780 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 RFC2P35250 354 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 CALCOCO2Q13137 446 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 RNF19BQ6ZMZ0 732 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 NECAB2Q7Z6G3 386 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 SCML4Q8N228 414 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 P3H4Q92791 437 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 FUBP3Q96I24 572 aaKnown RBP eCLIP24.26■■□□□ 1.47
SLIT3-204ENST00000518140 ADAM7Q9H2U9 754 aa24.26■■□□□ 1.47
SLIT3-204ENST00000518140 EFEMP2O95967 443 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 RBP3P10745 1247 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 USP46P62068 366 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 NOMO1Q15155 1222 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 P3H1Q32P28 736 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 CFAP58Q5T655 872 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 ALS2CLQ60I27 953 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 CCDC33Q8N5R6 958 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 LRRC45Q96CN5 670 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 TSPYL1Q9H0U9 437 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM204AQ9H8W3 233 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 NMUR1Q9HB89 426 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 AAASQ9NRG9 546 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 ABHD14A-ACY1A0A1B0GW23 586 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM72CH0Y354 149 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 CPB1P15086 417 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 GBP1P32455 592 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 ADRA1BP35368 520 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 CHKAP35790 457 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 YWHAGP61981 247 aaKnown RBP eCLIP24.25■■□□□ 1.47
SLIT3-204ENST00000518140 SLC10A2Q12908 348 aaPredicted RBP24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM72AQ5TYM5 149 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM72DQ6L9T8 149 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 TAC4Q86UU9 113 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM72BQ86X60 149 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 GOLGA6L1Q8N7Z2 621 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM71DQ8N9W8 422 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FRMD8P1Q9BZ68 369 aaPredicted RBP24.25■■□□□ 1.47
SLIT3-204ENST00000518140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.25■■□□□ 1.47
SLIT3-204ENST00000518140 ANAPC5Q9UJX4 755 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 NUDT5Q9UKK9 219 aa24.25■■□□□ 1.47
SLIT3-204ENST00000518140 KIAA0355O15063 1070 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 RAG1P15918 1043 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 RPL17P18621 184 aaKnown RBP24.24■■□□□ 1.47
SLIT3-204ENST00000518140 GBE1Q04446 702 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 ELAVL2Q12926 359 aaKnown RBP24.24■■□□□ 1.47
SLIT3-204ENST00000518140 GPS1Q13098 491 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 IZUMO3Q5VZ72 239 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 VSTM1Q6UX27 236 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 VSIG1Q86XK7 387 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 OR2W6PQ8NHA6 318 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 UBLCP1Q8WVY7 318 aaPredicted RBP24.24■■□□□ 1.47
SLIT3-204ENST00000518140 PGAP3Q96FM1 320 aaPredicted RBP24.24■■□□□ 1.47
SLIT3-204ENST00000518140 EPB41L4BQ9H329 900 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 OSER1Q9NX31 292 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 FBXW11Q9UKB1 542 aa24.24■■□□□ 1.47
SLIT3-204ENST00000518140 MTMR11A4FU01 709 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 MCF2LO15068 1137 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 GPR17Q13304 367 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 NETO2Q8NC67 525 aa24.23■■□□□ 1.47
SLIT3-204ENST00000518140 DQX1Q8TE96 717 aaKnown RBP24.23■■□□□ 1.47
SLIT3-204ENST00000518140 ZNF689Q96CS4 500 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms