RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 MAP3K7CLP57077 242 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 CEBPZQ03701 1054 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 ORC1Q13415 861 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 TRPC3Q13507 836 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 STARD3Q14849 445 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 GEN1Q17RS7 908 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 C8orf34Q49A92 452 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 IL27RAQ6UWB1 636 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 SCARA5Q6ZMJ2 495 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 STXBP4Q6ZWJ1 553 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 ACOT1Q86TX2 421 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 CACUL1Q86Y37 369 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 TMPRSS6Q8IU80 811 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 PDILTQ8N807 584 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 ZNF507Q8TCN5 953 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 PLEKHO2Q8TD55 490 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 SLC2A14Q8TDB8 520 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 FBXO44Q9H4M3 255 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 CSNK1G1Q9HCP0 422 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 TLR8Q9NR97 1041 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 THAP10Q9P2Z0 257 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 HMGXB4Q9UGU5 601 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 LSM7Q9UK45 103 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 SLC27A6Q9Y2P4 619 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 PCDHGB2Q9Y5G2 931 aa11.97□□□□□ -0.49
CTNNA1-205ENST00000517904 KNTC1P50748 2209 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 PTPRQQ9UMZ3 2332 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 VPS37CA5D8V6 355 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 EIF3DO15371 548 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 PENKP01210 267 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 KLKB1P03952 638 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 CSNK1EP49674 416 aaKnown RBP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 MFAP3P55082 362 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 FYB2Q5VWT5 728 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 C12orf29Q8N999 325 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 XXYLT1Q8NBI6 393 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 SIPA1Q96FS4 1042 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 TNIP3Q96KP6 325 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 CDC6Q99741 560 aa11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTNNA1-205ENST00000517904 A0A1W2PQH9 124 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 C1QL1O75973 258 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 STC2O76061 302 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 VNN1O95497 513 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 PRKCHP24723 683 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 OXTRP30559 389 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 ZNF132P52740 706 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 GOLGA8FQ08AF8 430 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 GOLGA8DPQ0D2H9 430 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 ZNF234Q14588 700 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 SMAD1Q15797 465 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 PTPRNQ16849 979 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 KIF19Q2TAC6 998 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 ZNF667Q5HYK9 610 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 KLHDC10Q6PID8 442 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 FAM124AQ86V42 546 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 NELFCDQ8IXH7 590 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 RBBP8NLQ8NC74 664 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 PRCCQ92733 491 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 PIWIL1Q96J94 861 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 FAM49BQ9NUQ9 324 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 SNX11Q9Y5W9 270 aa11.95□□□□□ -0.5
CTNNA1-205ENST00000517904 KCNK3O14649 394 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 NPC1O15118 1278 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 TNFSF14O43557 240 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 PHACTR2O75167 634 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 RARGP13631 454 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 ADORA2BP29275 332 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 PLA2G4AP47712 749 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 AFF3P51826 1226 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 NDST1P52848 882 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 BIRC3Q13489 604 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 NCOA4Q13772 614 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 E2F4Q16254 413 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 C10orf120Q5SQS8 335 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 TMEM215Q68D42 235 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 LAYNQ6UX15 382 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-205ENST00000517904 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms