RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 KCNJ18B7U540 433 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 RRP8O43159 456 aaKnown RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 DKK1O94907 266 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CYBBP04839 570 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CISD3P0C7P0 127 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 P4HA1P13674 534 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CHKAP35790 457 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 IL12RB1P42701 662 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 PLA2G4AP47712 749 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CYP2J2P51589 502 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 MYL6P60660 151 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 BIRC3Q13489 604 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 EIF4HQ15056 248 aaKnown RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 RABEP1Q15276 862 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 ZNF699Q32M78 642 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 DBX2Q6ZNG2 339 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 ANKS1BQ7Z6G8 1248 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 ADAT2Q7Z6V5 191 aaKnown RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CACUL1Q86Y37 369 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 FGFBP2Q9BYJ0 223 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 MKRN2Q9H000 416 aaKnown RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 CYLDQ9NQC7 956 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 SRPRBQ9Y5M8 271 aaKnown RBP9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
LINCR-0001-201ENST00000517732 LAMA5O15230 3695 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 FAM149AA5PLN7 773 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CAPN8A6NHC0 703 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 DFNA5O60443 496 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 IGLV3-19P01714 112 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 EPHX1P07099 455 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 FAM200BP0CF97 657 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 RALAP11233 206 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CDK4P11802 303 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 GRIA4P48058 902 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CSNK1EP49674 416 aaKnown RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 PSEN1P49768 467 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CLCN6P51797 869 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 AP3M2P53677 418 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 MFAP3P55082 362 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 MAP3K7CLP57077 242 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SNRPFP62306 86 aaKnown RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CYP24A1Q07973 514 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SMAD1Q15797 465 aaKnown RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 C10orf120Q5SQS8 335 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 KLHDC10Q6PID8 442 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 DHRS13Q6UX07 377 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SERPINA13PQ6UXR4 307 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SCARA5Q6ZMJ2 495 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 ZNF605Q86T29 641 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 ACOT1Q86TX2 421 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 FAM124AQ86V42 546 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 TMPRSS12Q86WS5 348 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 XXYLT1Q8NBI6 393 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 BAP1Q92560 729 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 IGSF8Q969P0 613 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SKA1Q96BD8 255 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 TMX3Q96JJ7 454 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CDK5RAP1Q96SZ6 601 aaKnown RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 TRIM9Q9C026 710 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 DCLK3Q9C098 648 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 CIPCQ9C0C6 399 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 DNAI2Q9GZS0 605 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 LHX5Q9H2C1 402 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SMYD3Q9H7B4 428 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 FBXO2Q9UK22 296 aaPredicted RBP9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 BTBD3Q9Y2F9 522 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 SNX11Q9Y5W9 270 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 UBE4BO95155 1302 aa9.54□□□□□ -0.88
LINCR-0001-201ENST00000517732 VPS37CA5D8V6 355 aaPredicted RBP9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 PLK4O00444 970 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 PCDHGA12O60330 932 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 GREM1O60565 184 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 TBX18O95935 607 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 PENKP01210 267 aaPredicted RBP9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 PRB1P04280 392 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 RARGP13631 454 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 CCDC130P13994 396 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 JUPP14923 745 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 ACO1P21399 889 aaKnown RBP9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 C21orf59P57076 290 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 COG7P83436 770 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 AMPD3Q01432 767 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 BNC1Q01954 994 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 ENPP2Q13822 863 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 ZNF234Q14588 700 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 GEN1Q17RS7 908 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 KIF19Q2TAC6 998 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 PAQR9Q6ZVX9 377 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 MARCH9Q86YJ5 346 aa9.53□□□□□ -0.88
LINCR-0001-201ENST00000517732 FUKQ8N0W3 1084 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms