RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ATF7IPQ6VMQ6 1270 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CPLX4Q7Z7G2 160 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 IZUMO1Q8IYV9 350 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ANKRD44Q8N8A2 993 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 PTGR2Q8N8N7 351 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SUPT20HQ8NEM7 779 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 OSCP1Q8WVF1 389 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ATG4AQ8WYN0 398 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 NPIPB3Q92617 1050 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 PPP1R10Q96QC0 940 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 OSBPL9Q96SU4 736 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 AP1M1Q9BXS5 423 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 AMBRA1Q9C0C7 1298 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SLC25A18Q9H1K4 315 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 MEGF9Q9H1U4 602 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 NRDE2Q9H7Z3 1164 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 KCNK9Q9NPC2 374 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SEMA4BQ9NPR2 832 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 NFKBIL1Q9UBC1 381 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ADD3Q9UEY8 706 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 GIMAP2Q9UG22 337 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 BAG5Q9UL15 447 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 RAB21Q9UL25 225 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 TRPC5Q9UL62 973 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CNOT6Q9ULM6 557 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 DRG1Q9Y295 367 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 NEU2Q9Y3R4 380 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 KDM3AQ9Y4C1 1321 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 B4DLN1 442 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 PPM1DO15297 605 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 TGFB1I1O43294 461 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 NOBOXO60393 691 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 RECQL4O94761 1208 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 GPANK1O95872 356 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ADRB2P07550 413 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 PDHA1P08559 390 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 LAMP2P13473 410 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 HARS2P49590 506 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 SLURP1P55000 103 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 FOXL2P58012 376 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 RNASE9P60153 205 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 PPP2CBP62714 309 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 PPP2CAP67775 309 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 RBM6P78332 1123 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ZBED6P86452 979 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 KIAA2012Q0VF49 1180 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 MESP2Q0VG99 397 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 BECN1Q14457 450 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 KCNJ12Q14500 433 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 HLXQ14774 488 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 PDCD4Q53EL6 469 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ARTNQ5T4W7 220 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 UBAP2Q5T6F2 1119 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 MFSD4BQ5TF39 518 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 B3GNTL1Q67FW5 361 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 NAIF1Q69YI7 327 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 DENND1BQ6P3S1 775 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 C16orf89Q6UX73 402 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 KIAA1324Q6UXG2 1013 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 MICALCLQ6ZW33 695 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 NFKBIDQ8NI38 313 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 METTL6Q8TCB7 284 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 USP6NLQ92738 828 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 NACC2Q96BF6 587 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ELP4Q96EB1 424 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 MASTLQ96GX5 879 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 WDYHV1Q96HA8 205 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 GNRHR2Q96P88 292 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 LENG8Q96PV6 779 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 OR14A2Q96R54 314 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 MPHOSPH9Q99550 1183 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 LBHD1Q9BQE6 289 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ALDH8A1Q9H2A2 487 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 TTYH1Q9H313 450 aaPredicted RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 ZCCHC17Q9NP64 241 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 SEPT11Q9NVA2 429 aaKnown RBP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 GDAQ9Y2T3 454 aa4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-488P-201ENST00000515918 hCG_1807616A0A1W2PRN6 198 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 MBD3L5A6NJ08 208 aaPredicted RBP4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 NKX2-8O15522 239 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 TULP3O75386 442 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 PGM3O95394 542 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 STARD3NLO95772 234 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 TUBB4AP04350 444 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 TMEM225BP0DP42 221 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 GATA3P23771 443 aa4.7□□□□□ -1.66
RNU6-488P-201ENST00000515918 MSX2P35548 267 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms